RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 PRKDCP78527 4128 aaKnown RBP7.3□□□□□ -1.24
HMGN1-201ENST00000288344 A0A1W2PPE3 182 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 PDCD5O14737 125 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 TNFAIP8O95379 198 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 TFAP2AP05549 437 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 CD24P25063 80 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 TGFBR1P36897 503 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 VEGFCP49767 419 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 GNMTQ14749 295 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 HERPUD1Q15011 391 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 NEDD8Q15843 81 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 FAM189A2Q15884 450 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 TMEM30BQ3MIR4 351 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 TRAT1Q6PIZ9 186 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 Q6ZS49 121 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 Q6ZTK2 550 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 OR13F1Q8NGS4 319 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 NEDD4LQ96PU5 975 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 URM1Q9BTM9 101 aaKnown RBP7.3□□□□□ -1.24
HMGN1-201ENST00000288344 RIMS4Q9H426 269 aaPredicted RBP7.3□□□□□ -1.24
HMGN1-201ENST00000288344 BEX1Q9HBH7 125 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 TRAPPC2LQ9UL33 140 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 SSR3Q9UNL2 185 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 SIGLEC9Q9Y336 463 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 RNF114Q9Y508 228 aa7.3□□□□□ -1.24
HMGN1-201ENST00000288344 NOTCH1P46531 2555 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 hCG_2014768A0A024R1R8 64 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 IGHV3-43A0A0B4J1X8 118 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 TOR1AO14656 332 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 ITGB1BP1O14713 200 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 IGHV3-43DP0DP04 118 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 RPS19P39019 145 aaKnown RBP7.29□□□□□ -1.24
HMGN1-201ENST00000288344 ALDH3B2P48448 385 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 SCAND1P57086 179 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 MADCAM1Q13477 382 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 SRSF7Q16629 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGN1-201ENST00000288344 PRR31Q5SQ13 230 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 C6orf183Q5T699 404 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 SFXN4Q6P4A7 337 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 TMEM219Q86XT9 240 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 OR8H3Q8N146 312 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 MFSD4AQ8N468 514 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 C3orf56Q8N813 242 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 OR52L2PQ8NGH6 319 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 OR56B1Q8NGI3 324 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 OR5H6Q8NGV6 325 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 OR10R2Q8NGX6 335 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 RTN4IP1Q8WWV3 396 aaPredicted RBP7.29□□□□□ -1.24
HMGN1-201ENST00000288344 SLC25A38Q96DW6 304 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 RBMXL1Q96E39 390 aaKnown RBP7.29□□□□□ -1.24
HMGN1-201ENST00000288344 CCDC140Q96MF4 163 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 KCTD7Q96MP8 289 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 RBM14Q96PK6 669 aaKnown RBP7.29□□□□□ -1.24
HMGN1-201ENST00000288344 CHCHD6Q9BRQ6 235 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 PARP12Q9H0J9 701 aaKnown RBP7.29□□□□□ -1.24
HMGN1-201ENST00000288344 PLEKHJ1Q9NW61 149 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 JPT1Q9UK76 154 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 ELF5Q9UKW6 265 aaPredicted RBP7.29□□□□□ -1.24
HMGN1-201ENST00000288344 PLXNB1O43157 2135 aa7.29□□□□□ -1.24
HMGN1-201ENST00000288344 IGKV1D-8A0A087WSZ0 117 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 IGHV1-3A0A0C4DH29 117 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 SMIM30A4D0T7 59 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 ZNF736B4DX44 427 aaPredicted RBP7.28□□□□□ -1.24
HMGN1-201ENST00000288344 SDCBPO00560 298 aaPredicted RBP7.28□□□□□ -1.24
HMGN1-201ENST00000288344 TIMM23O14925 209 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 TMEM127O75204 238 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 OR2F2O95006 317 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 CRYBA1P05813 215 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 SCTP09683 121 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 MYL9P24844 172 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 CEACAM3P40198 252 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 RAB7AP51149 207 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 CTF1Q16619 201 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 LTC4SQ16873 150 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 ZNF260Q3ZCT1 412 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 PLA1AQ53H76 456 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 DHRS7BQ6IAN0 325 aaPredicted RBP7.28□□□□□ -1.24
HMGN1-201ENST00000288344 C11orf88Q6PI97 169 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 ZNF833PQ6ZTB9 187 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 C16orf82Q7Z2V1 217 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 DRAM1Q8N682 238 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 NDNFQ8TB73 568 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 NEK7Q8TDX7 302 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 IFI27L2Q9H2X8 130 aa7.28□□□□□ -1.24
HMGN1-201ENST00000288344 SCO2A0A1W2PP80 73 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 BTBD17A6NE02 478 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 SPINT2O43291 252 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 LANCL1O43813 399 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 SSX5O60225 188 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 GAPDHP04406 335 aaKnown RBP7.27□□□□□ -1.24
HMGN1-201ENST00000288344 HIST1H1DP16402 221 aaKnown RBP7.27□□□□□ -1.24
HMGN1-201ENST00000288344 CD1BP29016 333 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 PPP1CCP36873 323 aaKnown RBP7.27□□□□□ -1.24
HMGN1-201ENST00000288344 ECI1P42126 302 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 RANBP1P43487 201 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 GNG10P50151 68 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 CCDC144NLQ6NUI1 221 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 IZUMO1Q8IYV9 350 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 OR10V1Q8NGI7 309 aa7.27□□□□□ -1.24
HMGN1-201ENST00000288344 GALMQ96C23 342 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms