RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 GLAP06280 429 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 SAA2P0DJI9 122 aaPredicted RBP9.95□□□□□ -0.82
CD44-203ENST00000278386 ZNF616Q08AN1 781 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 ECSCRQ19T08 205 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 STEAP3Q658P3 488 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 SIGIRRQ6IA17 410 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 C5orf24Q7Z6I8 188 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 ZNF554Q86TJ5 538 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 C8orf59Q8N0T1 100 aaPredicted RBP9.95□□□□□ -0.82
CD44-203ENST00000278386 ABHD5Q8WTS1 349 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 IL1F10Q8WWZ1 152 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 GALMQ96C23 342 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 ASCL2Q99929 193 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 NABP2Q9BQ15 211 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 UQCC2Q9BRT2 126 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 OR51J1Q9H342 316 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 CHMP1AQ9HD42 196 aaPredicted RBP9.95□□□□□ -0.82
CD44-203ENST00000278386 CNOT2Q9NZN8 540 aaKnown RBP9.95□□□□□ -0.82
CD44-203ENST00000278386 ABRACLQ9P1F3 81 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 VSIG4Q9Y279 399 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 ZNF256Q9Y2P7 627 aaPredicted RBP9.95□□□□□ -0.82
CD44-203ENST00000278386 ANKRD65E5RJM6 399 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 YPEL1O60688 119 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 BLVRBP30043 206 aaPredicted RBP9.94□□□□□ -0.82
CD44-203ENST00000278386 OR3A3P47888 321 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 GNB1P62873 340 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 HTD2P86397 168 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 PLGLAQ15195 96 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 C5orf64Q2M2E5 130 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 RBM48Q5RL73 367 aaKnown RBP9.94□□□□□ -0.82
CD44-203ENST00000278386 ZNF833PQ6ZTB9 187 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 ODF3L1Q8IXM7 274 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 PACRGLQ8N7B6 248 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 ZNF491Q8N8L2 437 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 OR1N2Q8NGR9 330 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 SETD6Q8TBK2 473 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 MYOZ3Q8TDC0 251 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 UBE2E2Q96LR5 201 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 YPEL2Q96QA6 119 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 CHCHD6Q9BRQ6 235 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 TMEM59Q9BXS4 323 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 ANKRD60Q9BZ19 345 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 KLK15Q9H2R5 256 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 ISYNA1Q9NPH2 558 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 C8orf4Q9NR00 106 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 GHRLQ9UBU3 117 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 STEAP1Q9UHE8 339 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 SCOCQ9UIL1 159 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 LSM4Q9Y4Z0 139 aaKnown RBP9.94□□□□□ -0.82
CD44-203ENST00000278386 SORL1Q92673 2214 aa9.94□□□□□ -0.82
CD44-203ENST00000278386 IGHV7-81A0A0B4J1V7 117 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 A0A1W2PN81 502 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 I3L521 148 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 ST8SIA5O15466 376 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 UBBP0CG47 229 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 CHATP28329 748 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 PPIFP30405 207 aaKnown RBP9.93□□□□□ -0.82
CD44-203ENST00000278386 CHRNA7P36544 502 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 GABPB1Q06547 395 aaPredicted RBP9.93□□□□□ -0.82
CD44-203ENST00000278386 INSL4Q14641 139 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 C6orf141Q5SZD1 244 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 OR10K2Q6IF99 312 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 FAM131AQ6UXB0 335 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 C6orf201Q7Z4U5 140 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 LYPD6Q86Y78 171 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 BPIFB6Q8NFQ5 453 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 RITA1Q96K30 269 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 SULT4A1Q9BR01 284 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 KCNK15Q9H427 330 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 A3GALT2U3KPV4 340 aa9.93□□□□□ -0.82
CD44-203ENST00000278386 OVOL1O14753 267 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 SAP30O75446 220 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 CD1AP06126 327 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 GNAO1P09471 354 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 INSL3P51460 131 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 NDPQ00604 133 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 RCN1Q15293 331 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 HMGN3Q15651 99 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 FAM27D1Q5T7N8 215 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 ASPHD1Q5U4P2 390 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 GLT8D1Q68CQ7 371 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 LIN54Q6MZP7 749 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 FAM71F2Q6NXP2 309 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 MOB1BQ7L9L4 216 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 SVOPQ8N4V2 548 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 NICN1Q9BSH3 213 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 FAAP24Q9BTP7 215 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 TMED9Q9BVK6 235 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 ALX4Q9H161 411 aaPredicted RBP9.92□□□□□ -0.82
CD44-203ENST00000278386 IFI27L2Q9H2X8 130 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 PIPOXQ9P0Z9 390 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 PSORS1C1Q9UIG5 152 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 ERGIC3Q9Y282 383 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 DNAH7Q8WXX0 4024 aa9.92□□□□□ -0.82
CD44-203ENST00000278386 H7C2Y5 167 aa9.91□□□□□ -0.82
CD44-203ENST00000278386 NDUFA3O95167 84 aa9.91□□□□□ -0.82
CD44-203ENST00000278386 IGLV1-40P01703 118 aa9.91□□□□□ -0.82
CD44-203ENST00000278386 RAB9AP51151 201 aa9.91□□□□□ -0.82
CD44-203ENST00000278386 SLURP1P55000 103 aa9.91□□□□□ -0.82
CD44-203ENST00000278386 RPS27AP62979 156 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms