RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Dazap2Q9DCP9 168 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gng13Q9JMF3 67 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 PoleQ9WVF7 2283 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr548-ps1A0A1B0GSG0 314 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 6330409D20RikA2AK85 162 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1157A2AVC4 312 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr66F8VQ01 311 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 PnkdQ69ZP3 385 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1280Q8VGG8 305 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Memo1Q91VH6 297 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Slc22a26Q91WJ2 552 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Arrdc1Q99KN1 434 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Glo1Q9CPU0 184 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Vmn1r40Q9EQ46 310 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm16368A0A1Y7VNG9 144 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Fam53aE9PV82 402 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Zfp108E9Q8I5 642 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm20834J3QM72 227 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Saa2P05367 122 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Itga5P11688 1053 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 McidasQ3UZ45 379 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tsr3Q5HZH2 323 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Hsf5Q5ND04 624 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Sh2d7Q8BI17 458 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rdh9Q8K5C8 317 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Slc25a22Q9D6M3 323 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Lysmd2Q9D7V2 215 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 1700069L16RikQ9D9H5 109 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tex101Q9JMI7 250 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Igkv4-63A0A0G2JFU6 117 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Enpp7D3Z6V6 446 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 P01822 137 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Igsf11P0C673 428 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Klk1b5P15945 261 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 MgmtP26187 211 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 AregP31955 248 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 RelbQ04863 558 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Vmn1r66Q8K4I0 310 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1240Q8VG73 314 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Yif1aQ91XB7 293 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Vgll1Q99NC0 307 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rcc1lQ9CYF5 461 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Ndufaf3Q9JKL4 185 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Dnajc13D4AFX7 2248 aaKnown RBP14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Trav12n-2A0A075B626 113 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Zfp229E9PWT2 705 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Mdh2P08249 338 aaKnown RBP14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 BlkP16277 499 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Cd40P27512 289 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rab3dP35276 219 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Q8BTC1 67 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Spem2Q8C5U4 503 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Sulf2Q8CFG0 875 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rbmxl1Q91VM5 388 aaKnown RBP14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Mrgpra6Q91ZC6 301 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Znf281Q99LI5 893 aa14.17□□□□□ -0.14
Trim28-201ENSMUST00000005705 Csmd1Q923L3 3564 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Ighv14-4A0A0A6YVR1 117 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr750E9Q0Z1 331 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr432E9Q8M2 312 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Obox6G3X9U1 347 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rap1aP62835 184 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Otx2P80206 289 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Dhrs2Q149L0 282 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr107Q7TRK4 309 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Zbtb49Q8BXX2 756 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Galnt6Q8C7U7 622 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Vmn1r193Q8R258 319 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1298Q8VGE6 312 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1038Q8VGS1 319 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rap1bQ99JI6 184 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Acy1Q99JW2 408 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Hsd17b11Q9EQ06 298 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr957Q9EQB7 311 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Cx3cr1Q9Z0D9 354 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Vps13cQ8BX70 3748 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Zfp648D3Z0W3 525 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm28051J3QMA2 81 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Ppp1ccP63087 323 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Osgin2Q3TEE9 550 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Il12rb1Q60837 738 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Pnrc2Q9CR73 140 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Mcts1Q9DB27 181 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr951Q9EQ94 314 aa14.16□□□□□ -0.14
Trim28-201ENSMUST00000005705 MpzP27573 248 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Crisp3Q03402 241 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm826Q3UQ74 109 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tmprss13Q5U405 543 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Epha5Q60629 876 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 JkampQ8BI36 311 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 A930004D18RikQ8C8W7 157 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr187Q8VEX6 308 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 RabifQ91X96 123 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gng10Q9CXP8 68 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Ube2dnl2A2AFH2 155 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Drd3P30728 446 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Apoc1P34928 88 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Dcaf7P61963 342 aaKnown RBP14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Eif5aP63242 154 aaKnown RBP14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1507Q0VEP0 313 aa14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms