RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 RBKSQ9H477 322 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 MAP1LC3B2A6NCE7 125 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF503-AS2A6NEH8 195 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 ARGFXA6NJG6 315 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 NGFP01138 241 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 OPN1MWP04001 364 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 RNF224P0DH78 156 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 OPN1MW2P0DN77 364 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 OPN1MW3P0DN78 364 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 IL2RGP31785 369 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 PKIAP61925 76 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 WDR25Q64LD2 544 aaPredicted RBP9.29□□□□□ -0.92
SNIP1-204ENST00000638725 SSX9Q7RTT3 188 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 LILRB2Q8N423 598 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 NECAP1Q8NC96 275 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 OR2Y1Q8NGV0 311 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 OR4X1Q8NH49 305 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 PSMF1Q92530 271 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 MAP1LC3BQ9GZQ8 125 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 SMOC1Q9H4F8 434 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 CDH20Q9HBT6 801 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 DEPPQ9NTK1 212 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 UFSP2Q9NUQ7 469 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 VAX2Q9UIW0 290 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 FREM1Q5H8C1 2179 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 TRAV24A0A0B4J272 114 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 SMCO3A2RU48 225 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 CD300LBA8K4G0 201 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 TGOLN2O43493 480 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 CYTIPO60759 359 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 IGKV1-5P01602 117 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 SLC25A6P12236 298 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 IL11RAQ14626 422 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 ADIRFQ15847 76 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 LRRC75BQ2VPJ9 315 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 REC114Q7Z4M0 266 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 UBALD1Q8TB05 177 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 IFI44Q8TCB0 444 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 SGCZQ96LD1 299 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 P2RX4Q99571 388 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 PSMG3Q9BT73 122 aaPredicted RBP9.28□□□□□ -0.92
SNIP1-204ENST00000638725 FREM2Q5SZK8 3169 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 A0A087X0M5 115 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 A0A1B0GX30 115 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF16P17020 682 aaPredicted RBP9.28□□□□□ -0.92
SNIP1-204ENST00000638725 GDF1P27539 372 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 IGFBP7Q16270 282 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 SPANXN5Q5MJ07 72 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 DNLZQ5SXM8 178 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 MRGPRGQ86SM5 289 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 PRR18Q8N4B5 295 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 OR10A7Q8NGE5 316 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 OR10V1Q8NGI7 309 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 OR4C12Q96R67 309 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 PITPNC1Q9UKF7 332 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 GAB2Q9UQC2 676 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 PPP1R3CQ9UQK1 317 aa9.28□□□□□ -0.92
SNIP1-204ENST00000638725 TNRC6BQ9UPQ9 1833 aaKnown RBP9.27□□□□□ -0.92
SNIP1-204ENST00000638725 PINLYPA6NC86 204 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 TSTD3H0UI37 97 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 K7ESF4 209 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 LILRA1O75019 489 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 MRPL33O75394 65 aaKnown RBP9.27□□□□□ -0.93
SNIP1-204ENST00000638725 IGLV2-14P01704 120 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 TMEM41BQ5BJD5 291 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 C16orf82Q7Z2V1 217 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 GTF3AQ92664 365 aaKnown RBP9.27□□□□□ -0.93
SNIP1-204ENST00000638725 SMIM7Q9BQ49 75 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 WDR61Q9GZS3 305 aaKnown RBP9.27□□□□□ -0.93
SNIP1-204ENST00000638725 RNF150Q9ULK6 438 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 KIAA2026Q5HYC2 2103 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 UBE2L5PA0A1B0GUS4 154 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 HMGB3O15347 200 aaKnown RBP9.27□□□□□ -0.93
SNIP1-204ENST00000638725 ZNF737O75373 536 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 IGKV1D-33P01593 117 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 IGKV1-33P01594 117 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 TUBG1P23258 451 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 FOLR3P41439 243 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 CD81P60033 236 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 COL10A1Q03692 680 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 Q0VFX4 171 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 HLA-BQ31612 363 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 NCR3LG1Q68D85 454 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 TMEM183AQ8IXX5 376 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 GPR87Q9BY21 358 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 CTDSP1Q9GZU7 261 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 RIMS4Q9H426 269 aaPredicted RBP9.27□□□□□ -0.93
SNIP1-204ENST00000638725 DLL3Q9NYJ7 618 aa9.27□□□□□ -0.93
SNIP1-204ENST00000638725 AMBPP02760 352 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 ERVS71-1P61550 626 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 HBG1P69891 147 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 HBG2P69892 147 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 SERF2P84101 59 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 SRYQ05066 204 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 CLEC12BQ2HXU8 276 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 ZNF585BQ52M93 769 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 LYSMD4Q5XG99 296 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 LHX4Q969G2 390 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 LSM10Q969L4 123 aaKnown RBP9.26□□□□□ -0.93
SNIP1-204ENST00000638725 RPUSD4Q96CM3 377 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms