RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 A0A1B0GV50 99 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 hCG_1809904A0A1W2PP81 198 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 A0A1W2PPE3 182 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 A0A1W2PR64 198 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 A0A1W2PR80 420 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 A0A1W2PRV1 198 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 LNP1A1A4G5 178 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 CXorf65A6NEN9 183 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 ARGFXA6NJG6 315 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 TMEM210A6NLX4 147 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 RNF212BA8MTL3 300 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 AP4M1O00189 453 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 SMPD2O60906 423 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 ARG1P05089 322 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 S100A6P06703 90 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 SELEP16581 610 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 SOX8P57073 446 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 UBE2KP61086 200 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 MRPL49Q13405 166 aaKnown RBP8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 HAGHQ16775 308 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 LRRC75BQ2VPJ9 315 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 SLC35E3Q7Z769 313 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 HAPLN4Q86UW8 402 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 ZNF429Q86V71 674 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 TMEM217Q8N7C4 229 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 OR51H1Q8NH63 302 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 SCGB1C1Q8TD33 95 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 GMPPAQ96IJ6 420 aaPredicted RBP8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 DEFB127Q9H1M4 99 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 C12orf49Q9H741 205 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 ZDHHC11Q9H8X9 412 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 CDH20Q9HBT6 801 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 HES4Q9HCC6 221 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 PSENENQ9NZ42 101 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 CISD1Q9NZ45 108 aaKnown RBP8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 CACNG5Q9UF02 275 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 MMP24Q9Y5R2 645 aa8.13□□□□□ -1.11
IGHV3-54-201ENST00000622166 ESPL1Q14674 2120 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 C1QTNF9BB2RNN3 333 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 B4DEV8 164 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 SIRPB1O00241 398 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 NDUFS6O75380 124 aaKnown RBP8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 NXPH3O95157 252 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 TAGLN2P37802 199 aaKnown RBP8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 SERF2P84101 59 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 ARL16Q0P5N6 197 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 TMEM267Q0VDI3 215 aaPredicted RBP8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 TGIF1Q15583 401 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 ZNF766Q5HY98 468 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 SLC35E4Q6ICL7 350 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 INO80CQ6PI98 192 aaPredicted RBP8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 CENPVQ7Z7K6 275 aaPredicted RBP8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 DRAM1Q8N682 238 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 RNASE11Q8TAA1 199 aaKnown RBP8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 TMEM9BQ9NQ34 198 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 TRAPPC2LQ9UL33 140 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 PPP1R3CQ9UQK1 317 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 TIMM9Q9Y5J7 89 aa8.12□□□□□ -1.11
IGHV3-54-201ENST00000622166 TRAV39A0A0B4J263 110 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 TMEM30CPA0ZSE6 113 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 C3orf80F5H4A9 247 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 H0YL77 283 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 CDX4O14627 284 aaPredicted RBP8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 NXPH2O95156 264 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 IGHG3P01860 377 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 S100A9P06702 114 aaKnown RBP8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 P0C879 139 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 IGHV1-2P23083 117 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 TUBG1P23258 451 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 GLIPR1P48060 266 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 HBG1P69891 147 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 HBG2P69892 147 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 DLK1P80370 383 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 FABP9Q0Z7S8 132 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 EIF4EBP1Q13541 118 aaPredicted RBP8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 IGFBP7Q16270 282 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 IZUMO4Q1ZYL8 232 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 RNFT1Q5M7Z0 435 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 SPATA46Q5T0L3 261 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 ADAM5Q6NVV9 412 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 FIP1L1Q6UN15 594 aaKnown RBP8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 TMEM14EPQ6UXP3 125 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 MYPOPQ86VE0 399 aaPredicted RBP8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 TCTEX1D1Q8N7M0 179 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 CYB561D1Q8N8Q1 229 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 TMEM178AQ8NBL3 297 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 PRR7Q8TB68 274 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 SLC25A40Q8TBP6 338 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 TCTEX1D2Q8WW35 142 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 IL1F10Q8WWZ1 152 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 PINX1Q96BK5 328 aaKnown RBP8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 P2RX4Q99571 388 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 OR2J1Q9GZK6 312 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 OR51B6Q9H340 312 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 TUBG2Q9NRH3 451 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 RPRMQ9NS64 109 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 CLCF1Q9UBD9 225 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 ARID1AO14497 2285 aa8.11□□□□□ -1.11
IGHV3-54-201ENST00000622166 A0A0C4DFX4 3053 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms