RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 NCBP2LA6PVI3 153 aaKnown RBP13.56□□□□□ -0.24
HMGN3-203ENST00000620514 SERPINE3A8MV23 424 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 PF4P02776 101 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 UBBP0CG47 229 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 SRMP19623 302 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 CHATP28329 748 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 HSD17B12Q53GQ0 312 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 LIPKQ5VXJ0 399 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 TRAT1Q6PIZ9 186 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 SLC35E3Q7Z769 313 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 Q8N9W7 124 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 OR52L2PQ8NGH6 319 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 OR2T10Q8NGZ9 312 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 SULT4A1Q9BR01 284 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 NICN1Q9BSH3 213 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 DUSP21Q9H596 190 aa13.56□□□□□ -0.24
HMGN3-203ENST00000620514 IGHG2P01859 326 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 UCHL1P09936 223 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 MYF6P23409 242 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 HTR2CP28335 458 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 CD1BP29016 333 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 ZNF137PP52743 207 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 RPS25P62851 125 aaKnown RBP13.55□□□□□ -0.24
HMGN3-203ENST00000620514 RPS27AP62979 156 aaKnown RBP13.55□□□□□ -0.24
HMGN3-203ENST00000620514 UNC119Q13432 240 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 TMEM30BQ3MIR4 351 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 MORN2Q502X0 79 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 TMEM91Q6ZNR0 172 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 Q6ZPA2 131 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 C18orf65Q6ZTR6 163 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 C6orf201Q7Z4U5 140 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 TGIF2LXQ8IUE1 241 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 CHPT1Q8WUD6 406 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 UFD1Q92890 307 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 NEDD4LQ96PU5 975 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 GFI1Q99684 422 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 FAAP24Q9BTP7 215 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 TMEM59Q9BXS4 323 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 RAB9BQ9NP90 201 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 OR2S2Q9NQN1 319 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 PLSCR3Q9NRY6 295 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 KCNIP1Q9NZI2 227 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 TPRKBQ9Y3C4 175 aa13.55□□□□□ -0.24
HMGN3-203ENST00000620514 DNAH3Q8TD57 4116 aa13.54□□□□□ -0.24
HMGN3-203ENST00000620514 MOSP00540 346 aa13.54□□□□□ -0.24
HMGN3-203ENST00000620514 HSMCR30P0CW71 290 aa13.54□□□□□ -0.24
HMGN3-203ENST00000620514 CD37P11049 281 aa13.54□□□□□ -0.24
HMGN3-203ENST00000620514 PPP1CCP36873 323 aaKnown RBP13.54□□□□□ -0.24
HMGN3-203ENST00000620514 QRFPP83859 136 aa13.54□□□□□ -0.24
HMGN3-203ENST00000620514 FOXB2Q5VYV0 432 aa13.54□□□□□ -0.24
HMGN3-203ENST00000620514 ANKRD60Q9BZ19 345 aa13.54□□□□□ -0.24
HMGN3-203ENST00000620514 A0A0A6YYD4 124 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 TMEM14DPA8MWL7 114 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 SLC22A1O15245 554 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 RGS10O43665 173 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 MAP2K4P45985 399 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 GPR12P47775 334 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 F2RL1P55085 397 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 RPL23AP62750 156 aaKnown RBP13.53□□□□□ -0.24
HMGN3-203ENST00000620514 TPBGQ13641 420 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 ETV3LQ6ZN32 361 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 STPG2Q8N412 459 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 KCNG3Q8TAE7 436 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 S1PR3Q99500 378 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 TM2D1Q9BX74 207 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 CCDC90BQ9GZT6 254 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 ABCG5Q9H222 651 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 LIN7CQ9NUP9 197 aaKnown RBP13.53□□□□□ -0.24
HMGN3-203ENST00000620514 NECAP2Q9NVZ3 263 aa13.53□□□□□ -0.24
HMGN3-203ENST00000620514 AURKAIP1Q9NWT8 199 aaPredicted RBP13.53□□□□□ -0.24
HMGN3-203ENST00000620514 TXNL1O43396 289 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 LANCL1O43813 399 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 CRHBPP24387 322 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 P2RY14Q15391 338 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 OR2W3Q7Z3T1 314 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 ZNF554Q86TJ5 538 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 FOXRED2Q8IWF2 684 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 ODF3L1Q8IXM7 274 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 ABHD14AQ9BUJ0 271 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 JPT1Q9UK76 154 aa13.52□□□□□ -0.25
HMGN3-203ENST00000620514 BPNT1O95861 308 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 BLVRBP30043 206 aaPredicted RBP13.51□□□□□ -0.25
HMGN3-203ENST00000620514 SLC35B1P78383 322 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 HTD2P86397 168 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 LSAMPQ13449 338 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 HMGN3Q15651 99 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 STEAP3Q658P3 488 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 REC114Q7Z4M0 266 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 LINC00482Q8N8I6 264 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 OR6M1Q8NGM8 313 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 MRAPQ8TCY5 172 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 RASL11BQ9BPW5 248 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 HSPB9Q9BQS6 159 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 MRPL20Q9BYC9 149 aaKnown RBP13.51□□□□□ -0.25
HMGN3-203ENST00000620514 LPAR5Q9H1C0 372 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 ISYNA1Q9NPH2 558 aa13.51□□□□□ -0.25
HMGN3-203ENST00000620514 AK6Q9Y3D8 172 aaKnown RBP13.51□□□□□ -0.25
HMGN3-203ENST00000620514 AP4M1O00189 453 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 SOCS1O15524 211 aa13.5□□□□□ -0.25
HMGN3-203ENST00000620514 YPEL1O60688 119 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms