RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 IFITM3Q01628 133 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 TGIF1Q15583 401 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 OR10AC1Q8NH08 325 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 RASL11BQ9BPW5 248 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 PHIPQ8WWQ0 1821 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 TMEM50BP56557 158 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 LCN2P80188 198 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 OR2Z1Q8NG97 314 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 PAXXQ9BUH6 204 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 RPS4XP62701 263 aaKnown RBP13.24□□□□□ -0.29
COL5A1-208ENST00000618395 LYZL2Q7Z4W2 148 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 AQP10Q96PS8 301 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 KCNMB2Q9Y691 235 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 NKX2-6A6NCS4 301 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 A8MWV9 139 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 K7ESF4 209 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 MPDU1O75352 247 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 DANCRP0C864 163 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 C2orf83Q53S99 150 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 GALNT14Q96FL9 552 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 DNAJB12Q9NXW2 375 aaKnown RBP13.24□□□□□ -0.29
COL5A1-208ENST00000618395 KCNE3Q9Y6H6 103 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 IGHV3-64DA0A0J9YX35 117 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 DNASE2O00115 360 aaPredicted RBP13.24□□□□□ -0.29
COL5A1-208ENST00000618395 UBE2V1Q13404 147 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 RUNX3Q13761 415 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 SAMD5Q5TGI4 173 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 OR4X1Q8NH49 305 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 PHLPP1O60346 1717 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 ARHGAP21Q5T5U3 1957 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 FAM53AQ6NSI3 398 aaPredicted RBP13.24□□□□□ -0.29
COL5A1-208ENST00000618395 MED12LQ86YW9 2145 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 DRD1P21728 446 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 ACSF3Q4G176 576 aaPredicted RBP13.24□□□□□ -0.29
COL5A1-208ENST00000618395 SIGLEC7Q9Y286 467 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 TMEM189A5PLL7 270 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 TSPAN2O60636 221 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 EPPINO95925 133 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 NGFP01138 241 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 KIR3DL2P43630 455 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 RAE1P78406 368 aaKnown RBP13.23□□□□□ -0.29
COL5A1-208ENST00000618395 SRSF6Q13247 344 aaKnown RBP13.23□□□□□ -0.29
COL5A1-208ENST00000618395 LYG1Q8N1E2 194 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 NOXO1Q8NFA2 376 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 APOBEC3DQ96AK3 386 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-208ENST00000618395 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 C2orf88Q9BSF0 95 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 GLRX2Q9NS18 164 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 MMDQ15546 238 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 GPR27Q9NS67 375 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 CLN8Q9UBY8 286 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 A0A1W2PR48 441 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 OR4A8P0C604 315 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 ZNF441Q8N8Z8 693 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 OR4X2Q8NGF9 303 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 RLN3Q8WXF3 142 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 PRDM13Q9H4Q3 707 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 GEMIN7Q9H840 131 aaKnown RBP13.23□□□□□ -0.29
COL5A1-208ENST00000618395 KBTBD11-OT1A0A1B0GTJ5 212 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 SPINK8P0C7L1 97 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 NKG7Q16617 165 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 KIAA1644Q3SXP7 199 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 DMRTC1Q5HYR2 192 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 ST6GALNAC6Q969X2 333 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 PPIL1Q9Y3C6 166 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 PPYP01298 95 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 SLC6A13Q9NSD5 602 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 RBPJLQ9UBG7 517 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 CACNA1BQ00975 2339 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 CEACAM16Q2WEN9 425 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 FIZ1Q96SL8 496 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 TUBA4BQ9H853 241 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 GAGE12BA1L429 117 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 C10orf128Q5T292 105 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 MRGPRFQ96AM1 343 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 USP3Q9Y6I4 520 aa13.23□□□□□ -0.29
COL5A1-208ENST00000618395 NPIPB6E9PJ23 425 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 NDUFS6O75380 124 aaKnown RBP13.22□□□□□ -0.29
COL5A1-208ENST00000618395 RND3P61587 244 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 DCAF12L2Q5VW00 463 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 PQLC2Q6ZP29 291 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 MESTQ5EB52 335 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 OR52E5Q8NH55 327 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 C4orf45Q96LM5 186 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 MAST2Q6P0Q8 1798 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 PTPRDP23468 1912 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 A0A1W2PQM1 296 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 CDX4O14627 284 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-208ENST00000618395 SFTPA2Q8IWL1 248 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 SFTPA1Q8IWL2 248 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 MRPL24Q96A35 216 aaKnown RBP13.22□□□□□ -0.29
COL5A1-208ENST00000618395 TMSB15BA0A087X1C1 80 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 PPICP45877 212 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 TFPI2P48307 235 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 LRRC10Q5BKY1 277 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 DNM1P46Q6ZS02 220 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 ATAD5Q96QE3 1844 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 IDSB3KWA1 339 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 MED29Q9NX70 200 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 HYAL1Q12794 435 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms