RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SYNGR2O43760 224 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 GLI4P10075 376 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 H3F3AP84243 136 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 ANKRD55Q3KP44 614 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 IGFL3Q6UXB1 125 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 YTHDF2Q9Y5A9 579 aaKnown RBP8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 HELTA6NFD8 242 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 J3QR06 171 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZNF90Q03938 601 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 FUT5Q11128 374 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 GUCA2BQ16661 112 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR10J6PQ8NGY7 276 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 HILPDAQ9Y5L2 63 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 TRAV20A0A0B4J274 112 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR2T8A6NH00 312 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 GABRB1P18505 474 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 RRN3P1Q2M238 152 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 POC1AQ8NBT0 407 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 PCNPQ8WW12 178 aaKnown RBP8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 SRRQ9GZT4 340 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 A0A0A6YYJ9 748 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 TRBV5-5A0A0J9YX44 114 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 HPXP02790 462 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 INHBBP09529 407 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 RFPL3SP0C7P2 107 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 RPL30P62888 115 aaKnown RBP8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 BVESQ8NE79 360 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 NKX6-2Q9C056 277 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 RANGRFQ9HD47 186 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 LYRM2Q9NU23 88 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 H0Y980 276 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR5AC1P0C628 307 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 GATA3P23771 443 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 CDC34P49427 236 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 FAM3AP98173 230 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 C3orf36Q3SXR2 165 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 C11orf87Q6NUJ2 197 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 NRIP2Q9BQI9 281 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 TINAGL1Q9GZM7 467 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 MAGT1Q9H0U3 335 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 C7orf69Q9H7B7 122 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 FAM206AQ9NX38 181 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 GNG13Q9P2W3 67 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 RABAC1Q9UI14 185 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 LHFPL6Q9Y693 200 aa8.37□□□□□ -1.07
TNFRSF9-204ENST00000615230 TGFAP01135 160 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 C19orf35Q6ZS72 473 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 GAPTQ8N292 157 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 FAM169BQ8N8A8 192 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 C1QTNF5Q9BXJ0 243 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 V9GYS6 101 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 PLXNA3P51805 1871 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 KLF7O75840 302 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 OPN1MWP04001 364 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 OPN1MW2P0DN77 364 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 OPN1MW3P0DN78 364 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 MAS1LP35410 378 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 RPEL1Q2QD12 228 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 PIGYQ3MUY2 71 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZNF385CQ66K41 422 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 PIP4P1Q86T03 277 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 CCDC190Q86UF4 302 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZNRF4Q8WWF5 429 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 PGLYRP3Q96LB9 341 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 DPM3Q9P2X0 92 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 NKX2-6A6NCS4 301 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 NPY1RP25929 384 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 SPCS3P61009 180 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 RPL8P62917 257 aaKnown RBP8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 BMPERQ8N8U9 685 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 MDS2Q8NDY4 140 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 FNDC1Q4ZHG4 1894 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 IGKV3D-15A0A087WSY6 115 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 IGHG3P01860 377 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 PPOXP50336 477 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 LINC00303Q3SY05 128 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR4A47Q6IF82 309 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 BAGE2Q86Y30 109 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 TMEM204Q9BSN7 226 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 POMT1Q9Y6A1 747 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 FAM90A26D6RGX4 464 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 PROB1E7EW31 1015 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 NEURL1O76050 574 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 FCGR3AP08637 254 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 NUTF2P61970 127 aaKnown RBP8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 LSM11P83369 360 aaKnown RBP eCLIP8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 TNFRSF14Q92956 283 aa8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 LSM10Q969L4 123 aaKnown RBP8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 ADAT3Q96EY9 351 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF9-204ENST00000615230 MPDU1O75352 247 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ALX3O95076 343 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZNF205O95201 554 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 COX19Q49B96 90 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 BAP18Q8IXM2 172 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR4P4Q8NGL7 312 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 GOLT1BQ9Y3E0 138 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 LINC00312Q9Y6C7 94 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 hCG_38984A0A1B0GV85 526 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 H7BYZ3 331 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms