RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ZNF660Q6AZW8 331 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-217ENST00000611848 C11orf87Q6NUJ2 197 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 Q71RC1 249 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-217ENST00000611848 ZNF546Q86UE3 836 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 SAXO1Q8IYX7 474 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 DEFB108BQ8NET1 73 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 OR51F2Q8NH61 342 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 MAFIPQ8WZ33 124 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 SULT4A1Q9BR01 284 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 FAAP24Q9BTP7 215 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 PKIBQ9C010 78 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 MFFQ9GZY8 342 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 ARL6Q9H0F7 186 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 TMEM160Q9NX00 188 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 AK3Q9UIJ7 227 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 KIF25Q9UIL4 384 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 ANXA10Q9UJ72 324 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 TNFSF18Q9UNG2 199 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 POLDIP2Q9Y2S7 368 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 TRAV20A0A0B4J274 112 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A10PA6NDY2 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A18PA6NE21 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A16PA6NEW6 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A20PA6NIJ5 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A8PA6NJQ4 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A7PA6NKC0 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A22PA8MWA6 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A12PA8MX19 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A5PA8MXJ8 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A23PA8MXZ1 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 SDCBPO00560 298 aaPredicted RBP7.34□□□□□ -1.24
SMAD4-217ENST00000611848 CCSO14618 274 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 GEMIN2O14893 280 aaKnown RBP7.34□□□□□ -1.24
SMAD4-217ENST00000611848 RHBDL1O75783 438 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 OR2F2O95006 317 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 PLATP00750 562 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 SFTPBP07988 381 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 MSMBP08118 114 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FCGR3AP08637 254 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 ACAA1P09110 424 aaPredicted RBP7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A15PP0C7V4 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A13PP0C7W8 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A14PP0C7W9 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A24PP0C7X0 464 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 GLRA1P23415 457 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 RBM11P57052 281 aaKnown RBP7.34□□□□□ -1.24
SMAD4-217ENST00000611848 RAB14P61106 215 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 OR2F1Q13607 317 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 ELP2Q6IA86 826 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 DHRS11Q6UWP2 260 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 GSG1LQ6UXU4 331 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 KCTD9Q7L273 389 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 CALHM1Q8IU99 346 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 KCNRGQ8N5I3 272 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 OR8B3Q8NGG8 313 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 CASTOR1Q8WTX7 329 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 PPP1R1CQ8WVI7 109 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 TMEM186Q96B77 213 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 NEIL1Q96FI4 390 aaPredicted RBP7.34□□□□□ -1.24
SMAD4-217ENST00000611848 SEC22AQ96IW7 307 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 OR8B2Q96RD0 313 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 HDHD3Q9BSH5 251 aaPredicted RBP7.34□□□□□ -1.24
SMAD4-217ENST00000611848 PDCD10Q9BUL8 212 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 NMES1Q9C002 83 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 RAB18Q9NP72 206 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 PGPEP1Q9NXJ5 209 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 RASL12Q9NYN1 266 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 COMMD9Q9P000 198 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 ZNF581Q9P0T4 197 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 ST3GAL6Q9Y274 331 aa7.34□□□□□ -1.24
SMAD4-217ENST00000611848 POLR3KQ9Y2Y1 108 aaPredicted RBP7.34□□□□□ -1.24
SMAD4-217ENST00000611848 TRBV6-7A0A0A0MS04 114 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 PPIAL4CA0A0B4J2A2 164 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 A8MXK9 166 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-217ENST00000611848 TNFRSF13BO14836 293 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-217ENST00000611848 SYNGR1O43759 233 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 PDCD6O75340 191 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 GYPAP02724 150 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 CTSDP07339 412 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-217ENST00000611848 PGA5P0DJD9 388 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 FUT3P21217 361 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 GNB2P62879 340 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 CYCSP99999 105 aaKnown RBP7.33□□□□□ -1.24
SMAD4-217ENST00000611848 HOXA4Q00056 320 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-217ENST00000611848 IL24Q13007 206 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 PIGYQ3MUY2 71 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 SLC51BQ86UW2 128 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 FAM90A1Q86YD7 464 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 POC1AQ8NBT0 407 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 COQ8AQ8NI60 647 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 SCARB1Q8WTV0 552 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 CMSS1Q9BQ75 279 aaKnown RBP7.33□□□□□ -1.24
SMAD4-217ENST00000611848 DNTTIP1Q9H147 329 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 LPAR2Q9HBW0 351 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 MED9Q9NWA0 146 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 HIF1ANQ9NWT6 349 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 KAAG1Q9UBP8 84 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 DNAJB11Q9UBS4 358 aa7.33□□□□□ -1.24
SMAD4-217ENST00000611848 TMA7Q9Y2S6 64 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms