RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	NABP2	Q9BQ15	211 aa		14.02	□□□□□ -0.17
IRF3-231	ENST00000602190	PDCD1LG2	Q9BQ51	273 aa		14.02	□□□□□ -0.17
IRF3-231	ENST00000602190	PARP11	Q9NR21	331 aa		14.02	□□□□□ -0.17
IRF3-231	ENST00000602190	NUBP2	Q9Y5Y2	271 aa		14.02	□□□□□ -0.17
IRF3-231	ENST00000602190		E9PI62	339 aa		14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	JTB	O76095	146 aa		14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	CDRT1	O95170	752 aa		14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	MRPL28	Q13084	256 aa	Known RBP	14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	HAGH	Q16775	308 aa		14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	LY6G6F	Q5SQ64	297 aa		14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	CCDC107	Q8WV48	283 aa		14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	JAM3	Q9BX67	310 aa		14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	ISG20L2	Q9H9L3	353 aa	Known RBP	14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	DHDH	Q9UQ10	334 aa		14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	FOXA2	Q9Y261	457 aa	Predicted RBP	14.01	□□□□□ -0.17
IRF3-231	ENST00000602190	AIP	O00170	330 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	SC5D	O75845	299 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	HBZ	P02008	142 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	HSPB1	P04792	205 aa	Known RBP	14	□□□□□ -0.17
IRF3-231	ENST00000602190	PITPNA	Q00169	270 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	MORN2	Q502X0	79 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	ZNF660	Q6AZW8	331 aa	Predicted RBP	14	□□□□□ -0.17
IRF3-231	ENST00000602190	LIN54	Q6MZP7	749 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	OR5AK2	Q8NH90	309 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	LGALS12	Q96DT0	336 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	RHOV	Q96L33	236 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	GPER1	Q99527	375 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	CST11	Q9H112	138 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	RAB9B	Q9NP90	201 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190	MBNL3	Q9NUK0	354 aa	Known RBP	14	□□□□□ -0.17
IRF3-231	ENST00000602190	STUB1	Q9UNE7	303 aa		14	□□□□□ -0.17
IRF3-231	ENST00000602190		A0A1W2PN81	502 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	SPINT2	O43291	252 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	FAS	P25445	335 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	CHRNA7	P36544	502 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	SYT6	Q5T7P8	510 aa	Predicted RBP	13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	MEDAG	Q5VYS4	303 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	ZNF833P	Q6ZTB9	187 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	ZNF554	Q86TJ5	538 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	SGPP2	Q8IWX5	399 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	CCDC197	Q8NCU1	140 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	OR1L1	Q8NH94	360 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	FLYWCH2	Q96CP2	140 aa	Known RBP	13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	OR4C12	Q96R67	309 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	ALG8	Q9BVK2	526 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	MRPL20	Q9BYC9	149 aa	Known RBP	13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	METTL9	Q9H1A3	318 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	TAS2R4	Q9NYW5	299 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190	GNG12	Q9UBI6	72 aa		13.99	□□□□□ -0.17
IRF3-231	ENST00000602190		A0A1W2PP11	408 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	MAGEB3	O15480	346 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	ZNF780A	O75290	641 aa	Predicted RBP	13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	GABRB1	P18505	474 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	ADARB1	P78563	741 aa	Known RBP	13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	RAB40B	Q12829	278 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	C6orf183	Q5T699	404 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	PYHIN1	Q6K0P9	492 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	TRAT1	Q6PIZ9	186 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	IL34	Q6ZMJ4	242 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	AMIGO2	Q86SJ2	522 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	HAPLN4	Q86UW8	402 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	SATL1	Q86VE3	508 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	OR10V1	Q8NGI7	309 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	ZNF251	Q9BRH9	671 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	FAM192A	Q9GZU8	254 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	TMEM138	Q9NPI0	162 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	FRAS1	Q86XX4	4008 aa		13.98	□□□□□ -0.17
IRF3-231	ENST00000602190	GYG2	O15488	501 aa		13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	RCC1	P18754	421 aa	Predicted RBP	13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	CX3CL1	P78423	397 aa		13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	LHFPL3	Q86UP9	236 aa		13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	TSEN15	Q8WW01	171 aa	Known RBP	13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	MRPL48	Q96GC5	212 aa	Known RBP	13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	MYCBP	Q99417	103 aa	Predicted RBP	13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	ABHD14A	Q9BUJ0	271 aa		13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	SPACA1	Q9HBV2	294 aa		13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	ERVK13-1	Q9NX77	482 aa		13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	JPT1	Q9UK76	154 aa		13.97	□□□□□ -0.17
IRF3-231	ENST00000602190	CA11	O75493	328 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	CSTB	P04080	98 aa	Known RBP	13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	ZNF93	P35789	620 aa	Predicted RBP	13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	GNMT	Q14749	295 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	ECSCR	Q19T08	205 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	LRRC36	Q1X8D7	754 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	AKIRIN2	Q53H80	203 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	ATAD3C	Q5T2N8	411 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	FAM71F2	Q6NXP2	309 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	OR4K15	Q8NH41	348 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	CASTOR1	Q8WTX7	329 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	OAZ3	Q9UMX2	235 aa		13.96	□□□□□ -0.17
IRF3-231	ENST00000602190	HERC2	O95714	4834 aa		13.96	□□□□□ -0.18
IRF3-231	ENST00000602190	RRH	O14718	337 aa		13.95	□□□□□ -0.18
IRF3-231	ENST00000602190	YPEL1	O60688	119 aa		13.95	□□□□□ -0.18
IRF3-231	ENST00000602190	GPX5	O75715	221 aa		13.95	□□□□□ -0.18
IRF3-231	ENST00000602190	GTF2F2	P13984	249 aa		13.95	□□□□□ -0.18
IRF3-231	ENST00000602190	IGFBP3	P17936	291 aa	Predicted RBP	13.95	□□□□□ -0.18
IRF3-231	ENST00000602190	SERPINA2	P20848	420 aa		13.95	□□□□□ -0.18
IRF3-231	ENST00000602190	HTD2	P86397	168 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms