RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 OR13F1Q8NGS4 319 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 OR1L1Q8NH94 360 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 MALSU1Q96EH3 234 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 ARHGAP5-AS1Q96IT6 56 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 HDHD3Q9BSH5 251 aaPredicted RBP12.78□□□□□ -0.36
USHBP1-206ENST00000596436 ZNF702PQ9H963 129 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 MBNL3Q9NUK0 354 aaKnown RBP12.78□□□□□ -0.36
USHBP1-206ENST00000596436 NECAP2Q9NVZ3 263 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 PLEKHJ1Q9NW61 149 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 AK3Q9UIJ7 227 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 DAPK2Q9UIK4 370 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 RAB22AQ9UL26 194 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 MINOS1-NBL1R4GNA1 71 aa12.78□□□□□ -0.36
USHBP1-206ENST00000596436 IGHV3-43A0A0B4J1X8 118 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 AIREO43918 545 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 NAPSAO96009 420 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 IGHV3-43DP0DP04 118 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 SNRPBP14678 240 aaKnown RBP12.77□□□□□ -0.37
USHBP1-206ENST00000596436 RAB6AP20340 208 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 HTR1DP28221 377 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 GNG10P50151 68 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 LOXL3P58215 753 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 OR9G1Q8NH87 305 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 NDNFQ8TB73 568 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 ZNF596Q8TC21 504 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 FUNDC2Q9BWH2 189 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 PECRQ9BY49 303 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 HSF4Q9ULV5 492 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 PSG11Q9UQ72 335 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 HILPDAQ9Y5L2 63 aa12.77□□□□□ -0.37
USHBP1-206ENST00000596436 TENM3Q9P273 2699 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 F2RL2O00254 374 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 SDCBPO00560 298 aaPredicted RBP12.76□□□□□ -0.37
USHBP1-206ENST00000596436 HBZP02008 142 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 VSIG10L2P0DP72 767 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 RAB13P51153 203 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 TIMM50Q3ZCQ8 353 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 C6orf183Q5T699 404 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 NDUFA11Q86Y39 141 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 PRR18Q8N4B5 295 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 OR56B1Q8NGI3 324 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 LGALS14Q8TCE9 139 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 MRAPQ8TCY5 172 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 WNT10AQ9GZT5 417 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 MMP28Q9H239 520 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 TAF9BQ9HBM6 251 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 AURKAIP1Q9NWT8 199 aaPredicted RBP12.76□□□□□ -0.37
USHBP1-206ENST00000596436 GFOD1Q9NXC2 390 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 DPM3Q9P2X0 92 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 KCNK7Q9Y2U2 307 aa12.76□□□□□ -0.37
USHBP1-206ENST00000596436 A0A1W2PPE3 182 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 BUB1B-PAK6H3BSN5 160 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 J3QR06 171 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 RAB27BO00194 218 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 TOR1AO14656 332 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 FBXO24O75426 580 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 RANBP1P43487 201 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 HMGN3Q15651 99 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 TPTE2P1Q5T6R2 138 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 ZNF880Q6PDB4 577 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 TRAT1Q6PIZ9 186 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 OR52M1Q8NGK5 317 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 PTX4Q96A99 478 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 MRPS26Q9BYN8 205 aaKnown RBP12.75□□□□□ -0.37
USHBP1-206ENST00000596436 TCF19Q9Y242 345 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 DNAH9Q9NYC9 4486 aa12.75□□□□□ -0.37
USHBP1-206ENST00000596436 SLC31A2O15432 143 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 SPINT2O43291 252 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 CD28P10747 220 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 PRRX1P54821 245 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 NCS1P62166 190 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 DIAPH2-AS1Q14236 149 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 HABP2Q14520 560 aaPredicted RBP12.74□□□□□ -0.37
USHBP1-206ENST00000596436 GNMTQ14749 295 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 CCBE1Q6UXH8 406 aaPredicted RBP12.74□□□□□ -0.37
USHBP1-206ENST00000596436 SLC16A12Q6ZSM3 486 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 LYG1Q8N1E2 194 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 OR10V1Q8NGI7 309 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 OR5H6Q8NGV6 325 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 OR10R2Q8NGX6 335 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 PHF21AQ96BD5 680 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 RAB3CQ96E17 227 aa12.74□□□□□ -0.37
USHBP1-206ENST00000596436 NAA50Q9GZZ1 169 aaKnown RBP12.74□□□□□ -0.37
USHBP1-206ENST00000596436 CHMP1AQ9HD42 196 aaPredicted RBP12.74□□□□□ -0.37
USHBP1-206ENST00000596436 TRBV6-6A0A0A6YYG2 114 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 A6NDX4 124 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 LEUTXA8MZ59 168 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 MFNGO00587 321 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 TFAP2AP05549 437 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 GNB3P16520 340 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 RPS19P39019 145 aaKnown RBP12.73□□□□□ -0.37
USHBP1-206ENST00000596436 ALDH3B2P48448 385 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 NSUN5P1Q3KNT7 163 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 IDNKQ5T6J7 187 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 ZNF554Q86TJ5 538 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 ZNF439Q8NDP4 499 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 WFDC9Q8NEX5 89 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 OR4F17Q8NGA8 305 aa12.73□□□□□ -0.37
USHBP1-206ENST00000596436 OR52L2PQ8NGH6 319 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms