RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 NDNFQ8TB73 568 aa12.32□□□□□ -0.44
TRIM47-206ENST00000592942 DAPK2Q9UIK4 370 aa12.32□□□□□ -0.44
TRIM47-206ENST00000592942 SLC31A2O15432 143 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 CHST1O43916 411 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 SNRPBP14678 240 aaKnown RBP12.31□□□□□ -0.44
TRIM47-206ENST00000592942 MDKP21741 143 aaPredicted RBP12.31□□□□□ -0.44
TRIM47-206ENST00000592942 RPS19P39019 145 aaKnown RBP12.31□□□□□ -0.44
TRIM47-206ENST00000592942 SERPINB10P48595 397 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 GNG10P50151 68 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 SPCS2Q15005 226 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 HMGN3Q15651 99 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 TRAT1Q6PIZ9 186 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 C12orf54Q6X4T0 127 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 Q6ZSV7 163 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 LINC00311Q8N616 119 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 C8orf31Q8N9H6 132 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 OR10R2Q8NGX6 335 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 DCSTAMPQ9H295 470 aa12.31□□□□□ -0.44
TRIM47-206ENST00000592942 BTBD17A6NE02 478 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 SPINT2O43291 252 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 TSPAN9O75954 239 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 CRYBA1P05813 215 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 Q3ZCU0 254 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 MORN2Q502X0 79 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 CT45A1Q5HYN5 189 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 PRR18Q8N4B5 295 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 OR52L2PQ8NGH6 319 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 OR5H6Q8NGV6 325 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 CT45A3Q8NHU0 189 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 ST6GALNAC6Q969X2 333 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 CREB3L1Q96BA8 519 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 RIMS4Q9H426 269 aaPredicted RBP12.3□□□□□ -0.44
TRIM47-206ENST00000592942 Q9N2K0 584 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 TCF19Q9Y242 345 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 MMP24Q9Y5R2 645 aa12.3□□□□□ -0.44
TRIM47-206ENST00000592942 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 MFNGO00587 321 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 GNB3P16520 340 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 CD24P25063 80 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 RAG2P55895 527 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 HTD2P86397 168 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 GNMTQ14749 295 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 SLC25A48Q6ZT89 311 aaKnown RBP12.29□□□□□ -0.44
TRIM47-206ENST00000592942 OR10V1Q8NGI7 309 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 LINC01006Q8NI28 216 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 RAB3CQ96E17 227 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 C16orf95Q9H693 158 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 OR2S2Q9NQN1 319 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 KCNIP1Q9NZI2 227 aa12.29□□□□□ -0.44
TRIM47-206ENST00000592942 ELF5Q9UKW6 265 aaPredicted RBP12.29□□□□□ -0.44
TRIM47-206ENST00000592942 POM121CA8CG34 1229 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 OOSP1A8MZH6 123 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 YPEL1O60688 119 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 TMEM127O75204 238 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 CEACAM3P40198 252 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 TMEM30BQ3MIR4 351 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 LY6G6FQ5SQ64 297 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 IDNKQ5T6J7 187 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 TMEM219Q86XT9 240 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 LGALS14Q8TCE9 139 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 DYNC2LI1Q8TCX1 351 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 CFHR4Q92496 578 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 SLC25A46Q96AG3 418 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 YPEL2Q96QA6 119 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
TRIM47-206ENST00000592942 ATG5Q9H1Y0 275 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 RAB9BQ9NP90 201 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 TENM1Q9UKZ4 2725 aa12.28□□□□□ -0.44
TRIM47-206ENST00000592942 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 METTL21EPA6NDL7 271 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 SCTP09683 121 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 HIST1H1DP16402 221 aaKnown RBP12.27□□□□□ -0.45
TRIM47-206ENST00000592942 ZNF137PP52743 207 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 MADCAM1Q13477 382 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 STEAP3Q658P3 488 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 DHRS7BQ6IAN0 325 aaPredicted RBP12.27□□□□□ -0.45
TRIM47-206ENST00000592942 CROCCP3Q8IVE0 287 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 ODF3L1Q8IXM7 274 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 OR10X1Q8NGY0 326 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 OR4F5Q8NH21 305 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 GALMQ96C23 342 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 SLC25A38Q96DW6 304 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 ZNF747Q9BV97 191 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 CHMP1AQ9HD42 196 aaPredicted RBP12.27□□□□□ -0.45
TRIM47-206ENST00000592942 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRIM47-206ENST00000592942 ABCB10Q9NRK6 738 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 GNG12Q9UBI6 72 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 JPT1Q9UK76 154 aa12.27□□□□□ -0.45
TRIM47-206ENST00000592942 AMMECR1Q9Y4X0 333 aaPredicted RBP12.27□□□□□ -0.45
TRIM47-206ENST00000592942 IGKV1-6A0A0C4DH72 117 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 CLPSL1A2RUU4 121 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 TIMM23O14925 209 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 PPP1CCP36873 323 aaKnown RBP12.26□□□□□ -0.45
TRIM47-206ENST00000592942 KIR2DS4P43632 304 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 RORCP51449 518 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 SCAND1P57086 179 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 KRTAP10-3P60369 221 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 ZNF816Q0VGE8 651 aaPredicted RBP12.26□□□□□ -0.45
TRIM47-206ENST00000592942 HABP2Q14520 560 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms