RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 ZNF780AO75290 641 aaPredicted RBP19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 HBZP02008 142 aa19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 GTF2F2P13984 249 aa19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 RCN1Q15293 331 aa19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 RPL22L1Q6P5R6 122 aaKnown RBP19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 TMEM65Q6PI78 240 aa19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 DCUN1D4Q92564 292 aa19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 CYYR1Q96J86 154 aa19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 RITA1Q96K30 269 aa19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 ZNF184Q99676 751 aaPredicted RBP19.9■□□□□ 0.78
CAPNS1-211ENST00000590874 SACSQ9NZJ4 4579 aa19.89■□□□□ 0.78
CAPNS1-211ENST00000590874 LANCL1O43813 399 aa19.89■□□□□ 0.77
CAPNS1-211ENST00000590874 IGLV1-40P01703 118 aa19.89■□□□□ 0.77
CAPNS1-211ENST00000590874 CNTFRP26992 372 aa19.89■□□□□ 0.77
CAPNS1-211ENST00000590874 TMEM30BQ3MIR4 351 aa19.89■□□□□ 0.77
CAPNS1-211ENST00000590874 OVCH2Q7RTZ1 564 aa19.89■□□□□ 0.77
CAPNS1-211ENST00000590874 OR13C5Q8NGS8 318 aa19.89■□□□□ 0.77
CAPNS1-211ENST00000590874 APH1BQ8WW43 257 aa19.89■□□□□ 0.77
CAPNS1-211ENST00000590874 CHCHD6Q9BRQ6 235 aa19.89■□□□□ 0.77
CAPNS1-211ENST00000590874 ETAA1Q9NY74 926 aa19.89■□□□□ 0.77
CAPNS1-211ENST00000590874 DNAH7Q8WXX0 4024 aa19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 IGFBP3P17936 291 aaPredicted RBP19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 ADARB1P78563 741 aaKnown RBP19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 CCDC58Q4VC31 144 aa19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 C6orf183Q5T699 404 aa19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 FAM27D1Q5T7N8 215 aa19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 OR2G6Q5TZ20 316 aa19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 ZNF429Q86V71 674 aa19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 OR51J1Q9H342 316 aa19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 PARP11Q9NR21 331 aa19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 RPL36Q9Y3U8 105 aaKnown RBP19.88■□□□□ 0.77
CAPNS1-211ENST00000590874 IGHV7-81A0A0B4J1V7 117 aa19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 FAM90A10PA6NDY2 464 aa19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 MCRIP1C9JLW8 97 aa19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 OVOL1O14753 267 aa19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 RCC1P18754 421 aaPredicted RBP19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 ACTBP60709 375 aa19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 GNMTQ14749 295 aa19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 GAPTQ8N292 157 aa19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 ALX4Q9H161 411 aaPredicted RBP19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 SPACA1Q9HBV2 294 aa19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 RAB9BQ9NP90 201 aa19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 GAR1Q9NY12 217 aaKnown RBP19.87■□□□□ 0.77
CAPNS1-211ENST00000590874 TRAV41A0A0B4J266 112 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 HLA-DRB1P01911 266 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 FRMD6-AS1P0C7T7 363 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 SPNP16150 400 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 ETV1P50549 477 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 RAB9AP51151 201 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 STEAP3Q658P3 488 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 RAB12Q6IQ22 244 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 ODF3L1Q8IXM7 274 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 MRPL20Q9BYC9 149 aaKnown RBP19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 FGF20Q9NP95 211 aaPredicted RBP19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 TENM2Q9NT68 2774 aa19.86■□□□□ 0.77
CAPNS1-211ENST00000590874 SAP30O75446 220 aa19.85■□□□□ 0.77
CAPNS1-211ENST00000590874 BLVRBP30043 206 aaPredicted RBP19.85■□□□□ 0.77
CAPNS1-211ENST00000590874 MORN2Q502X0 79 aa19.85■□□□□ 0.77
CAPNS1-211ENST00000590874 C5orf24Q7Z6I8 188 aa19.85■□□□□ 0.77
CAPNS1-211ENST00000590874 DLX4Q92988 240 aaPredicted RBP19.85■□□□□ 0.77
CAPNS1-211ENST00000590874 MUL1Q969V5 352 aa19.85■□□□□ 0.77
CAPNS1-211ENST00000590874 SMIM19Q96E16 107 aa19.85■□□□□ 0.77
CAPNS1-211ENST00000590874 ANKRD60Q9BZ19 345 aa19.85■□□□□ 0.77
CAPNS1-211ENST00000590874 OR2S2Q9NQN1 319 aa19.85■□□□□ 0.77
CAPNS1-211ENST00000590874 TRAV8-7A0A075B6U6 113 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 SLURP1P55000 103 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 GPR176Q14439 515 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 SMN1Q16637 294 aaKnown RBP19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 TRAT1Q6PIZ9 186 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 GLIPR1L1Q6UWM5 242 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 MINDY2Q8NBR6 621 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 OR52L2PQ8NGH6 319 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 NABP2Q9BQ15 211 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 ZNF251Q9BRH9 671 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 ABHD14AQ9BUJ0 271 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 TAF9BQ9HBM6 251 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 MRPS28Q9Y2Q9 187 aaKnown RBP19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 PEX16Q9Y5Y5 336 aa19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 EPPK1P58107 5090 aaKnown RBP19.84■□□□□ 0.77
CAPNS1-211ENST00000590874 TRBV5-5A0A0J9YX44 114 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 LOC100130705A0A1B0GUX0 176 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 NBR2O15453 112 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 OGG1O15527 345 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 SC5DO75845 299 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 LALBAP00709 142 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 GP9P14770 177 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 C5orf64Q2M2E5 130 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 SLC29A1Q99808 456 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 BANF2Q9H503 90 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 NKX1-2Q9UD57 310 aaPredicted RBP19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 FBXO7Q9Y3I1 522 aa19.83■□□□□ 0.77
CAPNS1-211ENST00000590874 LYL1P12980 280 aa19.82■□□□□ 0.76
CAPNS1-211ENST00000590874 PPP1CCP36873 323 aaKnown RBP19.82■□□□□ 0.76
CAPNS1-211ENST00000590874 NDPQ00604 133 aa19.82■□□□□ 0.76
CAPNS1-211ENST00000590874 C19orf54Q5BKX5 351 aa19.82■□□□□ 0.76
CAPNS1-211ENST00000590874 PQLC1Q8N2U9 271 aa19.82■□□□□ 0.76
CAPNS1-211ENST00000590874 MRPS24Q96EL2 167 aaKnown RBP19.82■□□□□ 0.76
CAPNS1-211ENST00000590874 MBNL3Q9NUK0 354 aaKnown RBP19.82■□□□□ 0.76
CAPNS1-211ENST00000590874 TRIM64CA6NLI5 447 aa19.81■□□□□ 0.76
CAPNS1-211ENST00000590874 SOX15O60248 233 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms