RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 ARPC1AQ92747 370 aa10.62□□□□□ -0.71
CLPTM1-208ENST00000588274 ORAI1Q96D31 301 aa10.62□□□□□ -0.71
CLPTM1-208ENST00000588274 GPER1Q99527 375 aa10.62□□□□□ -0.71
CLPTM1-208ENST00000588274 MRPL20Q9BYC9 149 aaKnown RBP10.62□□□□□ -0.71
CLPTM1-208ENST00000588274 ANKRD60Q9BZ19 345 aa10.62□□□□□ -0.71
CLPTM1-208ENST00000588274 C19orf73Q9NVV2 129 aa10.62□□□□□ -0.71
CLPTM1-208ENST00000588274 IMPAD1Q9NX62 359 aa10.62□□□□□ -0.71
CLPTM1-208ENST00000588274 A8MZ25 164 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 EI24O14681 340 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 SC5DO75845 299 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 HBZP02008 142 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 LGALS1P09382 135 aaKnown RBP10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 LIMS3P0CW19 117 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 LIMS4P0CW20 117 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 IGHV4-30-4P0DP06 118 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 EGR2P11161 476 aaPredicted RBP10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 IGFBP3P17936 291 aaPredicted RBP10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 RCC1P18754 421 aaPredicted RBP10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 SERPINA2P20848 420 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 VEGFCP49767 419 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 C5orf64Q2M2E5 130 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 TMEM30BQ3MIR4 351 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 STEAP3Q658P3 488 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 HAPLN4Q86UW8 402 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 NPBQ8NG41 125 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 CASTOR1Q8WTX7 329 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 NABP2Q9BQ15 211 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 METTL9Q9H1A3 318 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 PARP11Q9NR21 331 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 MBNL3Q9NUK0 354 aaKnown RBP10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 FRAS1Q86XX4 4008 aa10.61□□□□□ -0.71
CLPTM1-208ENST00000588274 NBR2O15453 112 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 RPSAP08865 295 aaKnown RBP10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 SNRPBP14678 240 aaKnown RBP10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 ZNF93P35789 620 aaPredicted RBP10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 MRPL28Q13084 256 aaKnown RBP10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 ATAD3CQ5T2N8 411 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 SYT6Q5T7P8 510 aaPredicted RBP10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 DDI2Q5TDH0 399 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 LYPD6Q86Y78 171 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 OR4K15Q8NH41 348 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 APH1BQ8WW43 257 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 TMEM106AQ96A25 262 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 ZMAT4Q9H898 229 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 PALMDQ9NP74 551 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 TMEM138Q9NPI0 162 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 MRPS18AQ9NVS2 196 aaKnown RBP10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 GNG12Q9UBI6 72 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 GMPPBQ9Y5P6 360 aa10.6□□□□□ -0.71
CLPTM1-208ENST00000588274 HERC2O95714 4834 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 LINC01619G3V211 115 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 MAGEB3O15480 346 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 GABPB1Q06547 395 aaPredicted RBP10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 MORN2Q502X0 79 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 SIGIRRQ6IA17 410 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 ZNF833PQ6ZTB9 187 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 OR52I1Q8NGK6 324 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 OR13C5Q8NGS8 318 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 GPR148Q8TDV2 347 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 AMBNQ9NP70 447 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 ING4Q9UNL4 249 aa10.59□□□□□ -0.71
CLPTM1-208ENST00000588274 TRAV8-7A0A075B6U6 113 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 TRBV5-5A0A0J9YX44 114 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 H3BNX3 289 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 LDLRAD4O15165 306 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 LALBAP00709 142 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 CSTBP04080 98 aaKnown RBP10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 OR8U9P0C7N5 309 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 OR3A3P47888 321 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 RAB40BQ12829 278 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 SRSF7Q16629 238 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 ZIK1Q3SY52 487 aaPredicted RBP10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 SLC22A6Q4U2R8 563 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 C6orf141Q5SZD1 244 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 PRR18Q8N4B5 295 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 OR52L2PQ8NGH6 319 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 OR6Q1Q8NGQ2 317 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 RHOXF1Q8NHV9 184 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 ISOC1Q96CN7 298 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 ZNF184Q99676 751 aaPredicted RBP10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 ZNF251Q9BRH9 671 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 THAP7Q9BT49 309 aaPredicted RBP10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 ABHD14AQ9BUJ0 271 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 IFI27L2Q9H2X8 130 aa10.58□□□□□ -0.72
CLPTM1-208ENST00000588274 SAA2-SAA4A0A096LPE2 208 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 A0A1W2PN81 502 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 SPINT2O43291 252 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 ZNF780AO75290 641 aaPredicted RBP10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 GPX5O75715 221 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 FADS2O95864 444 aaKnown RBP10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 SAA2P0DJI9 122 aaPredicted RBP10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 GTF2F2P13984 249 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 BDKRB2P30411 391 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 CHRNA7P36544 502 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 PPP1CCP36873 323 aaKnown RBP10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 ALDH3A2P51648 485 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 GBX2P52951 348 aaPredicted RBP10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 RPS11P62280 158 aaKnown RBP eCLIP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms