RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MBOAT4Q96T53 435 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 UQCC2Q9BRT2 126 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 NICN1Q9BSH3 213 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 HINT2Q9BX68 163 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GABARAPL3Q9BY60 117 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ULBP2Q9BZM5 246 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SPNS1Q9H2V7 528 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CLN6Q9NWW5 311 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GLTPQ9NZD2 209 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 MRM2Q9UI43 246 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TPRKBQ9Y3C4 175 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TIMM22Q9Y584 194 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 IGHV4-30-2A0A087WSY4 118 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TRAV25A0A0B4J276 109 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A0G2JND7 137 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A1B0GWA3 101 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 DHRS12A0PJE2 317 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 FOXI3A8MTJ6 420 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF878C9JN71 531 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 H7C2Y5 167 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 PLPP3O14495 311 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CRLF1O75462 422 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 BCHEP06276 602 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CCL3P10147 92 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 F8A1P23610 371 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CD40LGP29965 261 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CA5AP35218 305 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 UGT2B10P36537 528 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CD200P41217 278 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 IDH2P48735 452 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 RORCP51449 518 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 PON3Q15166 354 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 RBM48Q5RL73 367 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 NXNL2Q5VZ03 156 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM199XQ6PEV8 388 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 FBXW12Q6X9E4 464 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 RBM45Q8IUH3 476 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 MS4A15Q8N5U1 240 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF433Q8N7K0 673 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TCTEX1D1Q8N7M0 179 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 LINC00469Q8N7U9 141 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR1N2Q8NGR9 330 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR6K6Q8NGW6 343 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2T27Q8NH04 317 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 C18orf12Q96KH6 178 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OPN3Q9H1Y3 402 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 IKZF5Q9H5V7 419 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 FNDC4Q9H6D8 234 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC25A22Q9H936 323 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 NTN4Q9HB63 628 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 MEPEQ9NQ76 525 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 IL20Q9NYY1 176 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR1A1Q9P1Q5 309 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 RHBDD3Q9Y3P4 386 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ASXL3Q9C0F0 2248 aa1.53□□□□□ -2.17
SMCHD1-211ENST00000584897 SPG11Q96JI7 2443 aa1.53□□□□□ -2.17
SMCHD1-211ENST00000584897 TRAV9-2A0A087WT02 112 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 M0QZK8 103 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TNFRSF11BO00300 401 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ITGB1BP1O14713 200 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CREBL2O60519 120 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 BANF1O75531 89 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CST4P01036 141 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 IGKV3-15P01624 115 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CD2P06729 351 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 WNT2P09544 360 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 MUC1P15941 1255 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 GABRR1P24046 479 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 COX7A1P24310 79 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 IL3RAP26951 378 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 GSK3BP49841 420 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 NUDT2P50583 147 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 IDH3GP51553 393 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TAS2R19P59542 299 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 LCN2P80188 198 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CHD3Q12873 2000 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 FOXF1Q12946 379 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 FLOT2Q14254 428 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TRMT12Q53H54 448 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 PAGE3Q5JUK9 113 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 ADAMTSL4-AS1Q5T5F5 129 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 STUMQ69YW2 141 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC35D2Q76EJ3 337 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 HSD17B13Q7Z5P4 300 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM179BQ7Z7N9 219 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 MKXQ8IYA7 352 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 VKORC1L1Q8N0U8 176 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 OR51A2Q8NGJ7 313 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 OR13G1Q8NGZ3 307 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CDC26Q8NHZ8 85 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 APH1BQ8WW43 257 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM230Q96A57 120 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 PTX4Q96A99 478 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 FAM3DQ96BQ1 224 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 RCN3Q96D15 328 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 PITX2Q99697 317 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CIB1Q99828 191 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 OVOL2Q9BRP0 275 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 RTL8AQ9BWD3 113 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 SUCNR1Q9BXA5 334 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms