RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	ZNF107	Q9UII5	783 aa	Predicted RBP	9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	DIMT1	Q9UNQ2	313 aa	Known RBP	9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	EXOSC1	Q9Y3B2	195 aa	Known RBP	9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	WSB1	Q9Y6I7	421 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114		G3V318	75 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	RAMP3	O60896	148 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	IGHG4	P01861	327 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	MGMT	P16455	207 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	FST	P19883	344 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	PPP1CC	P36873	323 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	LSAMP	Q13449	338 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	DCTN2	Q13561	401 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	GPR176	Q14439	515 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ZNF260	Q3ZCT1	412 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	YIF1B	Q5BJH7	314 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	C6orf183	Q5T699	404 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	C10orf67	Q8IYJ2	551 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	OR11H1	Q8NG94	326 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	OR8H1	Q8NGG4	311 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	OR52L2P	Q8NGH6	319 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	C4orf3	Q8WVX3	66 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	TMEM80	Q96HE8	168 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	RITA1	Q96K30	269 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	MRPL20	Q9BYC9	149 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	KLK15	Q9H2R5	256 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	GNB4	Q9HAV0	340 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	TAF9B	Q9HBM6	251 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	OR2S2	Q9NQN1	319 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	CHCHD3	Q9NX63	227 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ZMAT5	Q9UDW3	170 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	SCOC	Q9UIL1	159 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114		U3KQK5	164 aa		9.08	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	TRBV5-7	A0A0A0MS05	114 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	IRGM	A1A4Y4	181 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	TXNL1	O43396	289 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	LY86	O95711	162 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	PSMB8	P28062	276 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	CAPG	P40121	348 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ZNF137P	P52743	207 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	GP2	P55259	537 aa	Known RBP	9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	DOC2B	Q14184	412 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114		Q3ZCU0	254 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	MORN2	Q502X0	79 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	NKAPL	Q5M9Q1	402 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	SIGIRR	Q6IA17	410 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	RNF152	Q8N8N0	203 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	GGH	Q92820	318 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ABHD14A	Q9BUJ0	271 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	PARP11	Q9NR21	331 aa		9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	LSM4	Q9Y4Z0	139 aa	Known RBP	9.07	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	RYR3	Q15413	4870 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ATP6V0E1	O15342	81 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	LANCL1	O43813	399 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	GPX5	O75715	221 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	IGF1	P05019	195 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	FUT3	P21217	361 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	OR3A3	P47888	321 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ACTB	P60709	375 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	GNB1	P62873	340 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ST3GAL4	Q11206	333 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	MED21	Q13503	144 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	TMEM65	Q6PI78	240 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ODF3L1	Q8IXM7	274 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ZNF485	Q8NCK3	441 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	MRPS24	Q96EL2	167 aa	Known RBP	9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114		Q96M66	194 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	RDH12	Q96NR8	316 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	DERL3	Q96Q80	235 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ZNF251	Q9BRH9	671 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ALX4	Q9H161	411 aa	Predicted RBP	9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	RAB9B	Q9NP90	201 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	KCNIP1	Q9NZI2	227 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	TENM3	Q9P273	2699 aa		9.06	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	IGHV7-81	A0A0B4J1V7	117 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	PDCD6	O75340	191 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	NHLRC4	P0CG21	123 aa	Predicted RBP	9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	OR5H8	P0DN80	308 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	CEL	P19835	753 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	FHL3	Q13643	280 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	KIAA0141	Q14154	515 aa	Predicted RBP	9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	INSL4	Q14641	139 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	TMEM30B	Q3MIR4	351 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ASPHD1	Q5U4P2	390 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	OR10K2	Q6IF99	312 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	TRAT1	Q6PIZ9	186 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	GAPT	Q8N292	157 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ZNF491	Q8N8L2	437 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	OR1N2	Q8NGR9	330 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	MRPL30	Q8TCC3	161 aa	Known RBP	9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	CASTOR1	Q8WTX7	329 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	IL1F10	Q8WWZ1	152 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	NABP2	Q9BQ15	211 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	ANKRD60	Q9BZ19	345 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	OR51J1	Q9H342	316 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	KCNK15	Q9H427	330 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	MBNL3	Q9NUK0	354 aa	Known RBP	9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	A3GALT2	U3KPV4	340 aa		9.05	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	SAA2-SAA4	A0A096LPE2	208 aa		9.04	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114	TRAV41	A0A0B4J266	112 aa		9.04	□□□□□ -0.96
CDK5RAP3-223	ENST00000582114		I3L521	148 aa		9.04	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms