RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 AIPO00170 330 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 LCE2BO14633 110 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 MAGEB3O15480 346 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 SPINT2O43291 252 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 RGS11O94810 467 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 CRIP2P52943 208 aaPredicted RBP9.72□□□□□ -0.85
SS18-219ENST00000581570 TMEM267Q0VDI3 215 aaPredicted RBP9.72□□□□□ -0.85
SS18-219ENST00000581570 TMED1Q13445 227 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 LRRC36Q1X8D7 754 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 ATAD3CQ5T2N8 411 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 RNLSQ5VYX0 342 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 STEAP3Q658P3 488 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 PYHIN1Q6K0P9 492 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 NPBQ8NG41 125 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 NEK7Q8TDX7 302 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 RAB9BQ9NP90 201 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 NUBP2Q9Y5Y2 271 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 CEPT1Q9Y6K0 416 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 FRAS1Q86XX4 4008 aa9.72□□□□□ -0.85
SS18-219ENST00000581570 GEMIN2O14893 280 aaKnown RBP9.71□□□□□ -0.86
SS18-219ENST00000581570 SLC16A6O15403 523 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 NDUFA3O95167 84 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 ZP3P21754 424 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 SMCPP49901 116 aaPredicted RBP9.71□□□□□ -0.86
SS18-219ENST00000581570 RBM11P57052 281 aaKnown RBP9.71□□□□□ -0.86
SS18-219ENST00000581570 TPPP2P59282 170 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 CX3CL1P78423 397 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 ALKBH1Q13686 389 aaKnown RBP9.71□□□□□ -0.86
SS18-219ENST00000581570 TMEM30BQ3MIR4 351 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 ASCL4Q6XD76 172 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 LINC00322Q6ZN03 302 aaPredicted RBP9.71□□□□□ -0.86
SS18-219ENST00000581570 ZNF497Q6ZNH5 498 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 SPATA24Q86W54 205 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 PRR18Q8N4B5 295 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 STX19Q8N4C7 294 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 PARP16Q8N5Y8 322 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 OR52N1Q8NH53 320 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 ABHD5Q8WTS1 349 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 NABP2Q9BQ15 211 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 THAP7Q9BT49 309 aaPredicted RBP9.71□□□□□ -0.86
SS18-219ENST00000581570 MRPL20Q9BYC9 149 aaKnown RBP9.71□□□□□ -0.86
SS18-219ENST00000581570 RANGRFQ9HD47 186 aaPredicted RBP9.71□□□□□ -0.86
SS18-219ENST00000581570 CNOT2Q9NZN8 540 aaKnown RBP9.71□□□□□ -0.86
SS18-219ENST00000581570 TRAPPC2LQ9UL33 140 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 RNF150Q9ULK6 438 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 ING4Q9UNL4 249 aa9.71□□□□□ -0.86
SS18-219ENST00000581570 DAPL1A0PJW8 107 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 SHISA3A0PJX4 238 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 J3QLW9 94 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 CDRT1O95170 752 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 HBZP02008 142 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
SS18-219ENST00000581570 ZNF19P17023 458 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 RAB3AP20336 220 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 CD40LGP29965 261 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 ACTBL2Q562R1 376 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 NHLRC3Q5JS37 347 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 SYT6Q5T7P8 510 aaPredicted RBP9.7□□□□□ -0.86
SS18-219ENST00000581570 LCN12Q6JVE5 192 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 CD200R1LQ6Q8B3 271 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 UNQ5815/PRO19632Q6UWF5 114 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 LINC00596Q86U02 117 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 PPP1R27Q86WC6 154 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 OR9G4Q8NGQ1 327 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 OR1L1Q8NH94 360 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 RFKQ969G6 155 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 PELI1Q96FA3 418 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 METTL9Q9H1A3 318 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 FBXL15Q9H469 300 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 SLA2Q9H6Q3 261 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 ZNF446Q9NWS9 450 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 DHDHQ9UQ10 334 aa9.7□□□□□ -0.86
SS18-219ENST00000581570 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 FCN1O00602 326 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 BRI3O95415 125 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 TRGV3P03979 118 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 KLF5Q13887 457 aaPredicted RBP9.69□□□□□ -0.86
SS18-219ENST00000581570 PLGLAQ15195 96 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 MPV17LQ2QL34 196 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 MORN2Q502X0 79 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 C6orf183Q5T699 404 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 KDM4DQ6B0I6 523 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 IL34Q6ZMJ4 242 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 Q8N402 240 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 OR51A2Q8NGJ7 313 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 OR8J1Q8NGP2 316 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 OR4K15Q8NH41 348 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 TSEN15Q8WW01 171 aaKnown RBP9.69□□□□□ -0.86
SS18-219ENST00000581570 C4orf36Q96KX1 117 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 THTPAQ9BU02 230 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 RIBC2Q9H4K1 309 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 PLEKHA3Q9HB20 300 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 MED4Q9NPJ6 270 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 OR2S2Q9NQN1 319 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 ENOPH1Q9UHY7 261 aa9.69□□□□□ -0.86
SS18-219ENST00000581570 ANKRD34BA5PLL1 514 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 RRHO14718 337 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 RPSAP08865 295 aaKnown RBP9.68□□□□□ -0.86
SS18-219ENST00000581570 FSTP19883 344 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 SERPINA2P20848 420 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms