RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MPZL2O60487 215 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 RAB36O95755 333 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 PSMA1P25786 263 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 KDELR2P33947 212 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 COILP38432 576 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 SULT1A2P50226 295 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 DEFA6Q01524 100 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 RBM48Q5RL73 367 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 OR4P4Q8NGL7 312 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 PPWD1Q96BP3 646 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 MED10Q9BTT4 135 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 BBS2Q9BXC9 721 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 SLC19A3Q9BZV2 496 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 ASCL3Q9NQ33 180 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 OR51B4Q9Y5P0 310 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 MAP3K19Q56UN5 1328 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 BRD4O60885 1362 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 CD109Q6YHK3 1445 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 NUP153P49790 1475 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 TEX14Q8IWB6 1497 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 PRXQ9BXM0 1461 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 TTC37Q6PGP7 1564 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 MYO5BQ9ULV0 1848 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 CACNA1SQ13698 1873 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 IGHV3OR15-7A0A075B7D8 119 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 C9J4A7 227 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 G3V3Q6 166 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 J3QLI3 93 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 CYTH3O43739 400 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 NDUFS6O75380 124 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 GABARAPL2P60520 117 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 RAB8AP61006 207 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 EBLN2Q6P2I7 272 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 TTC33Q6PID6 262 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 ZBTB8OSQ8IWT0 167 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 BOD1L2Q8IYS8 172 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 C2orf73Q8N5S3 287 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 ATP6V1C2Q8NEY4 427 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 OR8K1Q8NGG5 319 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 MFSD8Q8NHS3 518 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 DYNC2LI1Q8TCX1 351 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 GALMQ96C23 342 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 ATP10BO94823 1461 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 MADDQ8WXG6 1647 aa2.06□□□□□ -2.08
SMCHD1-205ENST00000581383 LINC00854A0A1B0GVQ3 168 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 TRPC5OSA6NMA1 111 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 MKRN2OSH3BPM6 223 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 M0QX08 132 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 TOR1AO14656 332 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 TP53I11O14683 189 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 PHYHO14832 338 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 CBR1P16152 277 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 SLAMF1Q13291 335 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 PMS2P3Q13401 168 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 OR8G1Q15617 311 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 CENPWQ5EE01 88 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 HENMT1Q5T8I9 393 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 XKRXQ6PP77 449 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 CRLF3Q8IUI8 442 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 OR2V1Q8NHB1 315 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 C20orf166-AS1Q96NR2 134 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 EBNA1BP2Q99848 306 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 CHST5Q9GZS9 411 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 VPREB3Q9UKI3 123 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 WASHC3Q9Y3C0 194 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 LRPPRCP42704 1394 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 PTPRMP28827 1452 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 GOLGA3Q08378 1498 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 MAGI3Q5TCQ9 1506 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 SAMD9Q5K651 1589 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 RAPGEF6Q8TEU7 1601 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 SHANK3Q9BYB0 1731 aa2.05□□□□□ -2.08
SMCHD1-205ENST00000581383 IGSF23A1L1A6 192 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 NEMFO60524 1076 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 UGT2B11O75310 529 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 PCF11O94913 1555 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 CTSEP14091 401 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 PVALBP20472 110 aaPredicted RBP2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 GADD45AP24522 165 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 DLX6P56179 175 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 FAM3AP98173 230 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 BSPH1Q075Z2 132 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 KIF14Q15058 1648 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 ZNHIT3Q15649 155 aaPredicted RBP2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 SPNS3Q6ZMD2 512 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 TCF24Q7RTU0 167 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 ZFYVE16Q7Z3T8 1539 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 VN1R4Q7Z5H5 301 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 MTERF4Q7Z6M4 381 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 DOLPP1Q86YN1 238 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 OR5C1Q8NGR4 320 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 ANGPTL6Q8NI99 470 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 SUN5Q8TC36 379 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 CD200R1Q8TD46 325 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 CTTNBP2Q8WZ74 1663 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 C11orf49Q9H6J7 331 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 LRRC19Q9H756 370 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 NRBP2Q9NSY0 501 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms