RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 PPP1CCP36873 323 aaKnown RBP6.97□□□□□ -1.29
GGA3-207ENST00000578896 OR3A3P47888 321 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 CDX1P47902 265 aaPredicted RBP6.97□□□□□ -1.29
GGA3-207ENST00000578896 CFHR3Q02985 330 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 LSAMPQ13449 338 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 FOXE3Q13461 319 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 INSL4Q14641 139 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 ZNF260Q3ZCT1 412 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 Q499Y3 187 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 AWAT2Q6E213 333 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 SIGIRRQ6IA17 410 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 LINC00596Q86U02 117 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 FAM71E2Q8N5Q1 922 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 C8orf31Q8N9H6 132 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 ZNF485Q8NCK3 441 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 OR11H1Q8NG94 326 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 OR5M8Q8NGP6 311 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 CASTOR1Q8WTX7 329 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 FAM46BQ96A09 425 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 TMEM80Q96HE8 168 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 MRPL20Q9BYC9 149 aaKnown RBP6.97□□□□□ -1.29
GGA3-207ENST00000578896 GNB4Q9HAV0 340 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 OR2S2Q9NQN1 319 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 TENM2Q9NT68 2774 aa6.97□□□□□ -1.29
GGA3-207ENST00000578896 PAK1IP1Q9NWT1 392 aaPredicted RBP6.97□□□□□ -1.29
GGA3-207ENST00000578896 SMPD3Q9NY59 655 aaPredicted RBP6.97□□□□□ -1.29
GGA3-207ENST00000578896 RCC2Q9P258 522 aaKnown RBP6.97□□□□□ -1.29
GGA3-207ENST00000578896 DIMT1Q9UNQ2 313 aaKnown RBP6.97□□□□□ -1.29
GGA3-207ENST00000578896 EXOSC1Q9Y3B2 195 aaKnown RBP6.97□□□□□ -1.29
GGA3-207ENST00000578896 LSM4Q9Y4Z0 139 aaKnown RBP6.97□□□□□ -1.29
GGA3-207ENST00000578896 RRP9O43818 475 aaKnown RBP6.96□□□□□ -1.3
GGA3-207ENST00000578896 GPX5O75715 221 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 LY86O95711 162 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 IGHG4P01861 327 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 MGMTP16455 207 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 SLC6A1P30531 599 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 ACTBP60709 375 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 GNB1P62873 340 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 ST3GAL4Q11206 333 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 KIAA0141Q14154 515 aaPredicted RBP6.96□□□□□ -1.3
GGA3-207ENST00000578896 MMDQ15546 238 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 MORN2Q502X0 79 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 C6orf183Q5T699 404 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 C9orf66Q5T8R8 295 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 ASPHD1Q5U4P2 390 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 OR10K2Q6IF99 312 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 LYPD6Q86Y78 171 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 OR8U1Q8NH10 309 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 MRPL30Q8TCC3 161 aaKnown RBP6.96□□□□□ -1.3
GGA3-207ENST00000578896 ALX4Q9H161 411 aaPredicted RBP6.96□□□□□ -1.3
GGA3-207ENST00000578896 KCNK15Q9H427 330 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 PARP11Q9NR21 331 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 CHCHD3Q9NX63 227 aaKnown RBP6.96□□□□□ -1.3
GGA3-207ENST00000578896 CKLFQ9UBR5 152 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 ZNF107Q9UII5 783 aaPredicted RBP6.96□□□□□ -1.3
GGA3-207ENST00000578896 U3KQK5 164 aa6.96□□□□□ -1.3
GGA3-207ENST00000578896 IGHV7-81A0A0B4J1V7 117 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 ATP6V0E1O15342 81 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 LANCL1O43813 399 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 RAMP3O60896 148 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 CELP19835 753 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 FUT3P21217 361 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 PSMB8P28062 276 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 BLVRBP30043 206 aaPredicted RBP6.95□□□□□ -1.3
GGA3-207ENST00000578896 ZNF137PP52743 207 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 GPR176Q14439 515 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 YIF1BQ5BJH7 314 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 FAM27D1Q5T7N8 215 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 LAIR2Q6ISS4 152 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 ODF3L1Q8IXM7 274 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 GAPTQ8N292 157 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 RNF152Q8N8N0 203 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 OR1N2Q8NGR9 330 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 C4orf3Q8WVX3 66 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 Q96M66 194 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 RDH12Q96NR8 316 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 DERL3Q96Q80 235 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 NABP2Q9BQ15 211 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 SULT4A1Q9BR01 284 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 FAAP24Q9BTP7 215 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 ABHD14AQ9BUJ0 271 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 GON7Q9BXV9 100 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 ANKRD60Q9BZ19 345 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 PARP12Q9H0J9 701 aaKnown RBP6.95□□□□□ -1.3
GGA3-207ENST00000578896 SPACA1Q9HBV2 294 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 FBXO7Q9Y3I1 522 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 A3GALT2U3KPV4 340 aa6.95□□□□□ -1.3
GGA3-207ENST00000578896 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
GGA3-207ENST00000578896 IRGMA1A4Y4 181 aa6.94□□□□□ -1.3
GGA3-207ENST00000578896 I3L521 148 aa6.94□□□□□ -1.3
GGA3-207ENST00000578896 ST8SIA5O15466 376 aa6.94□□□□□ -1.3
GGA3-207ENST00000578896 IGF1P05019 195 aa6.94□□□□□ -1.3
GGA3-207ENST00000578896 GNAO1P09471 354 aa6.94□□□□□ -1.3
GGA3-207ENST00000578896 FSTP19883 344 aa6.94□□□□□ -1.3
GGA3-207ENST00000578896 PPIFP30405 207 aaKnown RBP6.94□□□□□ -1.3
GGA3-207ENST00000578896 CAPGP40121 348 aa6.94□□□□□ -1.3
GGA3-207ENST00000578896 SLURP1P55000 103 aa6.94□□□□□ -1.3
GGA3-207ENST00000578896 GP2P55259 537 aaKnown RBP6.94□□□□□ -1.3
GGA3-207ENST00000578896 NDPQ00604 133 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms