RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CNOT4O95628 575 aaKnown RBP7.57□□□□□ -1.2
NCBP3-204ENST00000574911 HBE1P02100 147 aa7.57□□□□□ -1.2
NCBP3-204ENST00000574911 CELA3BP08861 270 aa7.57□□□□□ -1.2
NCBP3-204ENST00000574911 PGA5P0DJD9 388 aa7.57□□□□□ -1.2
NCBP3-204ENST00000574911 PPP1CBP62140 327 aa7.57□□□□□ -1.2
NCBP3-204ENST00000574911 ZNF146Q15072 292 aa7.57□□□□□ -1.2
NCBP3-204ENST00000574911 PPP1R3CQ9UQK1 317 aa7.57□□□□□ -1.2
NCBP3-204ENST00000574911 R4GN57 208 aa7.57□□□□□ -1.2
NCBP3-204ENST00000574911 FREM1Q5H8C1 2179 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 SYNGR2O43760 224 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 TNFSF15O95150 251 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 OR2C1O95371 312 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 IFNA5P01569 189 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 CD200P41217 278 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 RAB2AP61019 212 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 THNSL2Q86YJ6 484 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 MUCL1Q96DR8 90 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 LOXL4Q96JB6 756 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 OR2J1Q9GZK6 312 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 ZDHHC11Q9H8X9 412 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 TRAPPC2LQ9UL33 140 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 ARHGAP21Q5T5U3 1957 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 VPS13AQ96RL7 3174 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 IGHV2-5P01817 119 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 S100A6P06703 90 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 CTAG1AP78358 180 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 ARL16Q0P5N6 197 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 ZNF766Q5HY98 468 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 P4HA3Q7Z4N8 544 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 VASH2Q86V25 355 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 C1QL4Q86Z23 238 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 DEFB123Q8N688 67 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 RNASE11Q8TAA1 199 aaKnown RBP7.56□□□□□ -1.2
NCBP3-204ENST00000574911 RAB39BQ96DA2 213 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 GMPPAQ96IJ6 420 aaPredicted RBP7.56□□□□□ -1.2
NCBP3-204ENST00000574911 PSENENQ9NZ42 101 aa7.56□□□□□ -1.2
NCBP3-204ENST00000574911 METTL1Q9UBP6 276 aaKnown RBP7.56□□□□□ -1.2
NCBP3-204ENST00000574911 ARID1AO14497 2285 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 FREM2Q5SZK8 3169 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 LOC102723971A0A1B0GUV8 181 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 CDIPTO14735 213 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 FBP1P09467 338 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 OR8U8P0C7N1 319 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 IGHV1-2P23083 117 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 ERVS71-1P61550 626 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 S100A12P80511 92 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 MRPL49Q13405 166 aaKnown RBP7.55□□□□□ -1.2
NCBP3-204ENST00000574911 GABRA6Q16445 453 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 ALKBH6Q3KRA9 238 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 KHDC3LQ587J8 217 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 ATP1A1-AS1Q5TC04 95 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 DHRS13Q6UX07 377 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 HEPN1Q6WQI6 88 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 HAPLN4Q86UW8 402 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 PRR18Q8N4B5 295 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 ZNF525Q8N782 197 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 OR10G4Q8NGN3 311 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 CDH20Q9HBT6 801 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 LIN7CQ9NUP9 197 aaKnown RBP7.55□□□□□ -1.2
NCBP3-204ENST00000574911 A0A087WWC5 75 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 IQCF6A8MYZ5 107 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 H0YL77 283 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 SH2D1BO14796 132 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 S100A8P05109 93 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 IAPPP10997 89 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 HOXB1P14653 301 aaPredicted RBP7.55□□□□□ -1.2
NCBP3-204ENST00000574911 RAC2P15153 192 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 CEACAM6P40199 344 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 HES3Q5TGS1 186 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 ADAM5Q6NVV9 412 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 ZNF429Q86V71 674 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 CYB561D1Q8N8Q1 229 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 SLC25A40Q8TBP6 338 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 PSMG3Q9BT73 122 aaPredicted RBP7.55□□□□□ -1.2
NCBP3-204ENST00000574911 SEBOXQ9HB31 216 aaPredicted RBP7.55□□□□□ -1.2
NCBP3-204ENST00000574911 KCNS2Q9ULS6 477 aa7.55□□□□□ -1.2
NCBP3-204ENST00000574911 TMEM210A6NLX4 147 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 PPIHO43447 177 aaKnown RBP7.54□□□□□ -1.2
NCBP3-204ENST00000574911 NXPH2O95156 264 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 METTL15P1P0C7V9 234 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 TAGLN2P37802 199 aaKnown RBP7.54□□□□□ -1.2
NCBP3-204ENST00000574911 UBE2KP61086 200 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 UBE2NP61088 152 aaKnown RBP7.54□□□□□ -1.2
NCBP3-204ENST00000574911 ARG2P78540 354 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 ACSF3Q4G176 576 aaPredicted RBP7.54□□□□□ -1.2
NCBP3-204ENST00000574911 SLC25A24Q6NUK1 477 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 DRAM1Q8N682 238 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 UBALD1Q8TB05 177 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 SCGB1C1Q8TD33 95 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 MBD3L1Q8WWY6 194 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 TVP23CQ96ET8 276 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 RSG1Q9BU20 258 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 PARD6GQ9BYG4 376 aaPredicted RBP7.54□□□□□ -1.2
NCBP3-204ENST00000574911 HES4Q9HCC6 221 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 RBM7Q9Y580 266 aaKnown RBP7.54□□□□□ -1.2
NCBP3-204ENST00000574911 CNTRLQ7Z7A1 2325 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 ZNF727A8MUV8 499 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 IFNA17P01571 189 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 SMIM6P0DI80 62 aa7.54□□□□□ -1.2
NCBP3-204ENST00000574911 CBR1P16152 277 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms