RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 HES3Q5TGS1 186 aa9.51□□□□□ -0.89
RPAIN-212ENST00000573126 NANOS1Q8WY41 292 aaKnown RBP9.51□□□□□ -0.89
RPAIN-212ENST00000573126 PKIBQ9C010 78 aa9.51□□□□□ -0.89
RPAIN-212ENST00000573126 GP6Q9HCN6 339 aa9.51□□□□□ -0.89
RPAIN-212ENST00000573126 CACNA1DQ01668 2161 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 KIAA1324LA8MWY0 1029 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-212ENST00000573126 H0YL77 283 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 TXNL1O43396 289 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 LYZL6O75951 148 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 CNOT4O95628 575 aaKnown RBP9.5□□□□□ -0.89
RPAIN-212ENST00000573126 SP9P0CG40 484 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 CD46P15529 392 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 CEBPDP49716 269 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-212ENST00000573126 MEOX2P50222 304 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 RPS23P62266 143 aaKnown RBP9.5□□□□□ -0.89
RPAIN-212ENST00000573126 ARG2P78540 354 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 TBC1D28Q2M2D7 210 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 RSG1Q9BU20 258 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 RTL8AQ9BWD3 113 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 KIAA1456Q9P272 454 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 LAMA5O15230 3695 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 ARHGAP21Q5T5U3 1957 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 A0A1B0GU03 582 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 SMPD2O60906 423 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 NXPH2O95156 264 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 GRPP07492 148 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 METTL15P1P0C7V9 234 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 MMP9P14780 707 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 RNF212Q495C1 297 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 RBMS3Q6XE24 437 aaKnown RBP9.5□□□□□ -0.89
RPAIN-212ENST00000573126 CXorf67Q86X51 503 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-212ENST00000573126 CYB561D1Q8N8Q1 229 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 KDF1Q8NAX2 398 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-212ENST00000573126 FER1L6-AS2Q96M78 137 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 TUBA4BQ9H853 241 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 OR14J1Q9UGF5 321 aa9.5□□□□□ -0.89
RPAIN-212ENST00000573126 A0A1B0GW64 132 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 H3BQ15 152 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 IGKV1-5P01602 117 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 ACAA1P09110 424 aaPredicted RBP9.49□□□□□ -0.89
RPAIN-212ENST00000573126 AGAP20933 346 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 PPP1CBP62140 327 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 RPL23AP62750 156 aaKnown RBP9.49□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF497Q6ZNH5 498 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF561Q8N587 486 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 C5orf52A6NGY3 159 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF727A8MUV8 499 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 IFNA4P05014 189 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 CEACAM6P40199 344 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 TAS2R30P59541 319 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 OR8G1Q15617 311 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF766Q5HY98 468 aa9.49□□□□□ -0.89
RPAIN-212ENST00000573126 FAM53AQ6NSI3 398 aaPredicted RBP9.49□□□□□ -0.89
RPAIN-212ENST00000573126 LRP5LA4QPB2 252 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-212ENST00000573126 SYNGR2O43760 224 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 SCAF4O95104 1147 aaKnown RBP9.48□□□□□ -0.89
RPAIN-212ENST00000573126 OR2C1O95371 312 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 IFNA5P01569 189 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 UBE2NP61088 152 aaKnown RBP9.48□□□□□ -0.89
RPAIN-212ENST00000573126 TLE4Q04727 773 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 ARL16Q0P5N6 197 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 FABP9Q0Z7S8 132 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 HNF4GQ14541 408 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 ICAM4Q14773 271 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF585BQ52M93 769 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 FAM180AQ6UWF9 173 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 SLC25A40Q8TBP6 338 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 RAB39BQ96DA2 213 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 RAB40CQ96S21 281 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 VSIRQ9H7M9 311 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 IFT22Q9H7X7 185 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 MMP24Q9Y5R2 645 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 WSB1Q9Y6I7 421 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 PCNX2A6NKB5 2137 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 EP300Q09472 2414 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-212ENST00000573126 CACNA1HO95180 2353 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 BTBD17A6NE02 478 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 DFFBO76075 338 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 WISP2O76076 250 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
RPAIN-212ENST00000573126 ERVK11-1P61568 191 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 CDH20Q9HBT6 801 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 RNF150Q9ULK6 438 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 POLDIP2Q9Y2S7 368 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 URGCP-MRPS24S4R325 110 aa9.48□□□□□ -0.89
RPAIN-212ENST00000573126 PSPNO60542 156 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 CEACAM1P13688 526 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 IGHV1-2P23083 117 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF826PQ6ZT77 177 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 DRAM1Q8N682 238 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 OR8G5Q8NG78 346 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 CLDND2Q8NHS1 167 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 SMDT1Q9H4I9 107 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 RPRMQ9NS64 109 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 PSENENQ9NZ42 101 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 GNG13Q9P2W3 67 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 TINAGQ9UJW2 476 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 NPIPB11E5RHQ5 1161 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms