RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ADAT3Q96EY9 351 aaPredicted RBP11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 NEU3Q9UQ49 428 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 DNAJC13O75165 2243 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 IGKV3D-15A0A087WSY6 115 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 IGKV3-15P01624 115 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 PAXXQ9BUH6 204 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 ZNHIT1O43257 154 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 UPK3AO75631 287 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 ZNF735P0CB33 412 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 TWIST1Q15672 202 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 BVESQ8NE79 360 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 OR5AU1Q8NGC0 362 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 HSPB8Q9UJY1 196 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 DTX4Q9Y2E6 619 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 A0A1W2PPV9 198 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 RAB29O14966 203 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 SLC16A13Q7RTY0 426 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 SMRP1Q8NCR6 262 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 FGF11Q92914 225 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 GHITMQ9H3K2 345 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 XIRP1Q702N8 1843 aaKnown RBP11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 SHANK3Q9BYB0 1731 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 SUCLG1P53597 346 aaKnown RBP11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 C11orf91Q3C1V1 193 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 ZNF721Q8TF20 911 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 PTX4Q96A99 478 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 TBX15Q96SF7 602 aa11.85□□□□□ -0.51
CX3CL1-204ENST00000565912 HYPMO75409 117 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 C19orf54Q5BKX5 351 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 MRGPRGQ86SM5 289 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 MRPS18BQ9Y676 258 aaKnown RBP11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 SMCHD1A6NHR9 2005 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 STPG1Q5TH74 334 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 GFRA1P56159 465 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 TMEM52Q8NDY8 209 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 C16orf92Q96LL3 132 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 CGB1A6NKQ9 187 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 ZNF324O75467 553 aaPredicted RBP11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 IGF2P01344 180 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 SLC35B1P78383 322 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 GABRA6Q16445 453 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 ZNF502Q8TBZ5 544 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 RAB33BQ9H082 229 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 UBE2L6O14933 153 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 CDS2O95674 445 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 CXCL3P19876 107 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 TM4SF20Q53R12 229 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 OR4C12Q96R67 309 aa11.84□□□□□ -0.51
CX3CL1-204ENST00000565912 FOXS1O43638 330 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 HIST1H1BP16401 226 aaKnown RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 MRPL30Q8TCC3 161 aaKnown RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 A0A0J9YW62 118 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 CTXND1A0A1B0GTU2 59 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 TMEM218A2RU14 115 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 B4DEV8 164 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 SS18L1O75177 396 aaPredicted RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 GAPDHP04406 335 aaKnown RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 RPL27AP46776 148 aaKnown RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 RBM11P57052 281 aaKnown RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 AMMECR1LQ6DCA0 310 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 FAM216AQ8WUB2 273 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 RGP1Q92546 391 aaPredicted RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 POM121Q96HA1 1249 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 PACRGQ96M98 296 aaPredicted RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 GUCD1Q96NT3 240 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 CFHR5Q9BXR6 569 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 DHRS7CA6NNS2 312 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 STAG3L2P0CL84 134 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 UCP2P55851 309 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 ZNF658BQ4V348 819 aaPredicted RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 OR10J6PQ8NGY7 276 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 OR4A5Q8NH83 315 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 OR2V2Q96R30 315 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 PLAC1Q9HBJ0 212 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 MCM3APO60318 1980 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 HPRT1P00492 218 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 CELA2AP08217 269 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 EFNB2P52799 333 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 SMAGPQ0VAQ4 97 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 LGALSLQ3ZCW2 172 aaPredicted RBP11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 TMEM78Q5T7P6 136 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 DIRC2Q96SL1 478 aa11.83□□□□□ -0.52
CX3CL1-204ENST00000565912 IFITM10A6NMD0 228 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 H3BQ15 152 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 NKX2-8O15522 239 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 FAM74A3Q4VXF1 159 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 HSF4Q9ULV5 492 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 HAX1O00165 279 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 PEBP1P30086 187 aaKnown RBP11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 BPIFA4PQ86YQ2 179 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 CBLN2Q8IUK8 224 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 ST6GAL2Q96JF0 529 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 METTL1Q9UBP6 276 aaKnown RBP11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 C7orf77A4D0Y5 90 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 MAS1LP35410 378 aa11.82□□□□□ -0.52
CX3CL1-204ENST00000565912 DPH3Q96FX2 82 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms