RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 LYL1P12980 280 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 ID4P47928 161 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 SOX8P57073 446 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 ZNF260Q3ZCT1 412 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 FBXW9Q5XUX1 488 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 ADAMTSL4Q6UY14 1074 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 OR8A1Q8NGG7 326 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 C1QTNF9BB2RNN3 333 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 PRSS1P07477 247 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 CBLN1P23435 193 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 EDDM3BP56851 147 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 SAMD5Q5TGI4 173 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 LINC00596Q86U02 117 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 OR8B2Q96RD0 313 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 MYO16Q9Y6X6 1858 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 MCM3APO60318 1980 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 NDUFB4O95168 129 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 PPYP01298 95 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 ISG15P05161 165 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 WNT5AP41221 380 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 CXCL17Q6UXB2 119 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 CALHM1Q8IU99 346 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 CA13Q8N1Q1 262 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 ZBTB34Q8NCN2 500 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 IRF7Q92985 503 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 GJD4Q96KN9 370 aaPredicted RBP5.48□□□□□ -1.53
CLK3-212ENST00000563418 FNDC4Q9H6D8 234 aaPredicted RBP5.48□□□□□ -1.53
CLK3-212ENST00000563418 HIF1ANQ9NWT6 349 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 ORM1P02763 201 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 SP1P08047 785 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 GLI4P10075 376 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 C2orf68Q2NKX9 166 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 HES3Q5TGS1 186 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 DOK4Q8TEW6 326 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 ADOQ96SZ5 270 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 SLC25A33Q9BSK2 321 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 POLDIP2Q9Y2S7 368 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 MRPS18CQ9Y3D5 142 aaKnown RBP5.48□□□□□ -1.53
CLK3-212ENST00000563418 IGLV3-16A0A075B6K0 115 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 IGHV2OR16-5A0A0B4J2B6 119 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 ADM5C9JUS6 153 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 M0QZ24 198 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 MRPL58Q14197 206 aaKnown RBP5.48□□□□□ -1.53
CLK3-212ENST00000563418 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.48□□□□□ -1.53
CLK3-212ENST00000563418 MARCH3Q86UD3 253 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 Q8IYB0 196 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 OR1N2Q8NGR9 330 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 CYB5D2Q8WUJ1 264 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
CLK3-212ENST00000563418 DUSP13Q9UII6 198 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 PDCD11Q14690 1871 aaKnown RBP5.48□□□□□ -1.53
CLK3-212ENST00000563418 YBX1P67809 324 aaKnown RBP5.48□□□□□ -1.53
CLK3-212ENST00000563418 DEFB128Q7Z7B8 93 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 FER1L6-AS1Q8NA97 138 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 CADM4Q8NFZ8 388 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 LRRC61Q9BV99 259 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 RPL7P18124 248 aaKnown RBP5.48□□□□□ -1.53
CLK3-212ENST00000563418 GAB4Q2WGN9 574 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 LYSMD4Q5XG99 296 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 THSD4Q6ZMP0 1018 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 COMMD5Q9GZQ3 224 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 B4GALT7Q9UBV7 327 aa5.48□□□□□ -1.53
CLK3-212ENST00000563418 PGPEP1LA6NFU8 196 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 VSIG8P0DPA2 414 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 ZNF121P58317 390 aaPredicted RBP5.47□□□□□ -1.53
CLK3-212ENST00000563418 UNQ5815/PRO19632Q6UWF5 114 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 MVB12AQ96EY5 273 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 RNF126Q9BV68 326 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
CLK3-212ENST00000563418 K7N7A8 449 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 M0R135 149 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 SPINK8P0C7L1 97 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 OR1D5P58170 312 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 CEACAM16Q2WEN9 425 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 PRRT2Q7Z6L0 340 aaPredicted RBP5.47□□□□□ -1.53
CLK3-212ENST00000563418 ZNF799Q96GE5 643 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 LOC107984156A0A0G2JMH3 177 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 H3BML4 177 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 C17orf67Q0P5P2 114 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 TEX43Q6ZNM6 134 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 TCF23Q7RTU1 214 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 ARL17AQ8IVW1 177 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 GNG12Q9UBI6 72 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 MYADML2A6NDP7 307 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 F8W1H4 67 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 FOXL2P58012 376 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 TRAT1Q6PIZ9 186 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 FAM131CQ96AQ9 280 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 RPEQ96AT9 228 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 RPL36A-HNRNPH2H7BZ11 118 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 IL3RAP26951 378 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 ATOH7Q8N100 152 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 OR10D3Q8NH80 312 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 LSM10Q969L4 123 aaKnown RBP5.47□□□□□ -1.53
CLK3-212ENST00000563418 C19orf24Q9BVV8 132 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 RTL8AQ9BWD3 113 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 DNAJB12Q9NXW2 375 aaKnown RBP5.47□□□□□ -1.53
CLK3-212ENST00000563418 C3orf80F5H4A9 247 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 OR3A4PP47883 348 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 UCP3P55916 312 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms