RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 PARLQ9H300 379 aa16.03■□□□□ 0.16
RAB40C-206ENST00000561781 IGHV2-26A0A0B4J1V2 119 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 TRAV34A0A0B4J273 112 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 GRIFINA4D1Z8 144 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 FOXI3A8MTJ6 420 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-206ENST00000561781 WISP1O95388 367 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 ARR3P36575 388 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 GABRA2P47869 451 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 SLC6A8P48029 635 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 KRTDAPP60985 99 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 SRPXP78539 464 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 TRIM61Q5EBN2 209 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 NIT1Q86X76 327 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 OR5D18Q8NGL1 313 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 ZNF596Q8TC21 504 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 OR51E1Q8TCB6 317 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 FAM71F1Q96KD3 344 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-206ENST00000561781 GPER1Q99527 375 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 ZFYVE21Q9BQ24 234 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 LIME1Q9H400 295 aa16.02■□□□□ 0.16
RAB40C-206ENST00000561781 OTOGLQ3ZCN5 2332 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 TRAV36DV7A0A075B6V5 113 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 CD99P14209 185 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 LINC00310P59036 64 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 FOXL1Q12952 345 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF726P1Q15940 193 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 DMRTC1Q5HYR2 192 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 FFAR4Q5NUL3 377 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 SAXO1Q8IYX7 474 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 TMEM234Q8WY98 164 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 PSMF1Q92530 271 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 MEGF9Q9H1U4 602 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 ANXA10Q9UJ72 324 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 FBXL7Q9UJT9 491 aa16.02■□□□□ 0.15
RAB40C-206ENST00000561781 CEP192Q8TEP8 1941 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 CRISP2P16562 243 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 EXT1Q16394 746 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 PRSS57Q6UWY2 283 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 ODF3L1Q8IXM7 274 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 OR10G6Q8NH81 332 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 RNF133Q8WVZ7 376 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 ZDHHC11Q9H8X9 412 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF160Q9HCG1 818 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 TBC1D29Q9UFV1 150 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 HEBP2Q9Y5Z4 205 aa16.01■□□□□ 0.15
RAB40C-206ENST00000561781 IGLC7A0M8Q6 106 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 NKX2-6A6NCS4 301 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 CORTO00230 105 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 PHF1O43189 567 aaPredicted RBP16■□□□□ 0.15
RAB40C-206ENST00000561781 TNFSF14O43557 240 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF205O95201 554 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 PVRP15151 417 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 PLPPR5Q32ZL2 321 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF542PQ5EBM4 170 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 PINX1Q96BK5 328 aaKnown RBP16■□□□□ 0.15
RAB40C-206ENST00000561781 CPAMD8Q8IZJ3 1885 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 A0A1W2PPC4 97 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 C10orf142B7Z368 130 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF154Q13106 437 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 PHLDA2Q53GA4 152 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 LRRC10Q5BKY1 277 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 LYSMD4Q5XG99 296 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 KLHL24Q6TFL4 600 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 COMMD2Q86X83 199 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 CCDC71LQ8N9Z2 235 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 SUMF1Q8NBK3 374 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 OR13H1Q8NG92 308 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 BMFQ96LC9 184 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF286AQ9HBT8 521 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 NECAP2Q9NVZ3 263 aa16■□□□□ 0.15
RAB40C-206ENST00000561781 MCTS1Q9ULC4 181 aaKnown RBP16■□□□□ 0.15
RAB40C-206ENST00000561781 C17orf51A8MQB3 221 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 MSR1P21757 451 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 SLC22A18ASQ8N1D0 253 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 MRPL30Q8TCC3 161 aaKnown RBP15.99■□□□□ 0.15
RAB40C-206ENST00000561781 PSMG3Q9BT73 122 aaPredicted RBP15.99■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF292O60281 2723 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 KIAA2026Q5HYC2 2103 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 ASPMQ8IZT6 3477 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 HLA-DOBP13765 273 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 PSMB3P49720 205 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 OR4A47Q6IF82 309 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 BAGE3Q86Y29 109 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 BAGE2Q86Y30 109 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 PLPPR1Q8TBJ4 325 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 SCGB1C1Q8TD33 95 aa15.99■□□□□ 0.15
RAB40C-206ENST00000561781 HDHD3Q9BSH5 251 aaPredicted RBP15.99■□□□□ 0.15
RAB40C-206ENST00000561781 IGKV1D-43A0A0B4J1Z2 117 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 GDF9O60383 454 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 HNRNPA2B1P22626 353 aaKnown RBP15.98■□□□□ 0.15
RAB40C-206ENST00000561781 MDH2P40926 338 aaKnown RBP15.98■□□□□ 0.15
RAB40C-206ENST00000561781 RIPPLY3P57055 190 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 KIR2DS3Q14952 304 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 C1QL2Q7Z5L3 287 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 NXT1Q9UKK6 140 aaKnown RBP15.98■□□□□ 0.15
RAB40C-206ENST00000561781 SLC17A4Q9Y2C5 497 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 PI4KAP42356 2102 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 LHX2P50458 406 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 SERF2P84101 59 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 PRAMEF20Q5VT98 475 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms