RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 TMEM239Q8WW34 195 aa1.13□□□□□ -2.23
PSMA4-221ENST00000560842 LRRC39Q96DD0 335 aa1.13□□□□□ -2.23
PSMA4-221ENST00000560842 OR52B2Q96RD2 323 aa1.13□□□□□ -2.23
PSMA4-221ENST00000560842 C11orf1Q9H5F2 150 aa1.13□□□□□ -2.23
PSMA4-221ENST00000560842 IFT46Q9NQC8 304 aa1.13□□□□□ -2.23
PSMA4-221ENST00000560842 USP42Q9H9J4 1324 aaKnown RBP1.13□□□□□ -2.23
PSMA4-221ENST00000560842 SLX4Q8IY92 1834 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 ARHGAP32A7KAX9 2087 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 GOLGA8IPA6NC78 632 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 SIGLEC16A6NMB1 481 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 H0YC42 278 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 CD36P16671 472 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 ACTR1BP42025 376 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 OR10A3P58181 314 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 HENMT1Q5T8I9 393 aaKnown RBP1.12□□□□□ -2.23
PSMA4-221ENST00000560842 MTERF4Q7Z6M4 381 aaKnown RBP1.12□□□□□ -2.23
PSMA4-221ENST00000560842 YIPF7Q8N8F6 280 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 OR4X1Q8NH49 305 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 C16orf78Q8WTQ4 265 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 MRAP2Q96G30 205 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 MBOAT7Q96N66 472 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 HBEGFQ99075 208 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 TBX5Q99593 518 aa1.12□□□□□ -2.23
PSMA4-221ENST00000560842 NCKAP5O14513 1909 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 RP1L1Q8IWN7 2480 aaPredicted RBP1.11□□□□□ -2.23
PSMA4-221ENST00000560842 A0A1B0GW15 77 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 DHRS12A0PJE2 317 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 LY6HO94772 140 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 CCL2P13500 99 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 TIMM23BQ5SRD1 257 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 AHSA2Q719I0 299 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 ZBTB8OSQ8IWT0 167 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 PDCL2Q8N4E4 241 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 OR11H1Q8NG94 326 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 EBNA1BP2Q99848 306 aaKnown RBP1.11□□□□□ -2.23
PSMA4-221ENST00000560842 GTSF1LQ9H1H1 148 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 MRPS16Q9Y3D3 137 aaKnown RBP1.11□□□□□ -2.23
PSMA4-221ENST00000560842 FIS1Q9Y3D6 152 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 ABCB11O95342 1321 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 ATG2BQ96BY7 2078 aa1.11□□□□□ -2.23
PSMA4-221ENST00000560842 PRRC2BQ5JSZ5 2229 aaKnown RBP1.11□□□□□ -2.23
PSMA4-221ENST00000560842 KDM5BQ9UGL1 1544 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 KIAA0232Q92628 1395 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 RGS12O14924 1447 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 IGHV3-73A0A0B4J1V6 119 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 RAB19A4D1S5 217 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 VPS37CA5D8V6 355 aaPredicted RBP1.1□□□□□ -2.23
PSMA4-221ENST00000560842 B4DEV8 164 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 K7EQS6 105 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 PSMA1P25786 263 aaKnown RBP1.1□□□□□ -2.23
PSMA4-221ENST00000560842 FGF12P61328 243 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 ZNRF2Q8NHG8 242 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 TMIGD2Q96BF3 282 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 CATSPER2Q96P56 530 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 PRRG3Q9BZD7 231 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 XKR8Q9H6D3 395 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 PSMD13Q9UNM6 376 aa1.1□□□□□ -2.23
PSMA4-221ENST00000560842 IGKV2-29A2NJV5 120 aaPredicted RBP1.09□□□□□ -2.23
PSMA4-221ENST00000560842 ANGP03950 147 aaKnown RBP1.09□□□□□ -2.23
PSMA4-221ENST00000560842 ATF1P18846 271 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 KRTAP10-4P60372 401 aaPredicted RBP1.09□□□□□ -2.23
PSMA4-221ENST00000560842 GABARAPL2P60520 117 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 SLC35A2P78381 396 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 PDK2Q15119 407 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 ZNF283Q8N7M2 679 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 OR10A6Q8NH74 314 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 SPACA4Q8TDM5 124 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 IFT81Q8WYA0 676 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 RORBQ92753 470 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 CDCA4Q9BXL8 241 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 PECRQ9BY49 303 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 HAUS4Q9H6D7 363 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 DMAC2Q9NW81 257 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 NDUFB11Q9NX14 153 aa1.09□□□□□ -2.23
PSMA4-221ENST00000560842 NUP153P49790 1475 aaKnown RBP1.09□□□□□ -2.24
PSMA4-221ENST00000560842 DENND4BO75064 1496 aaPredicted RBP1.08□□□□□ -2.24
PSMA4-221ENST00000560842 H3BPC8 53 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 GPR171O14626 319 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 SGCEO43556 437 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 IVLP07476 585 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 GADD45AP24522 165 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 KCNJ3P48549 501 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 TSPEAR-AS2P59090 65 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 UBE2KP61086 200 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 DEFA6Q01524 100 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 ZBTB6Q15916 424 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 MAPK14Q16539 360 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 OR10J3Q5JRS4 329 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 RASL11AQ6T310 242 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 CCDC121Q6ZUS5 278 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 OR5K1Q8NHB7 308 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 LRRC20Q8TCA0 184 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 MSANTD3Q96H12 275 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 MND1Q9BWT6 205 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 TMEM216Q9P0N5 145 aa1.08□□□□□ -2.24
PSMA4-221ENST00000560842 MRM2Q9UI43 246 aaKnown RBP1.08□□□□□ -2.24
PSMA4-221ENST00000560842 KMT2BQ9UMN6 2715 aaPredicted RBP1.08□□□□□ -2.24
PSMA4-221ENST00000560842 ARRDC5A6NEK1 342 aa1.07□□□□□ -2.24
PSMA4-221ENST00000560842 NDUFS8O00217 210 aa1.07□□□□□ -2.24
PSMA4-221ENST00000560842 PHYHO14832 338 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms