RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 NRN1LQ496H8 165 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 WDR38Q5JTN6 314 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 COL5A1-AS1Q5SY13 56 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 PLXDC2Q6UX71 529 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 NUFIP2Q7Z417 695 aaKnown RBP6.88□□□□□ -1.31
RTF1-205ENST00000558298 ABHD12BQ7Z5M8 362 aaPredicted RBP6.88□□□□□ -1.31
RTF1-205ENST00000558298 CATSPERDQ86XM0 798 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 H1FOOQ8IZA3 346 aaPredicted RBP6.88□□□□□ -1.31
RTF1-205ENST00000558298 KIR2DL5AQ8N109 375 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 RFLNBQ8N5W9 214 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 CHST4Q8NCG5 386 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 OR5T1Q8NG75 326 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 OR51L1Q8NGJ5 315 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 OR6N2Q8NGY6 317 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 MARCH1Q8TCQ1 289 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 Q8WTZ3 238 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 RNF166Q96A37 237 aaPredicted RBP6.88□□□□□ -1.31
RTF1-205ENST00000558298 ZNF385AQ96PM9 386 aaKnown RBP6.88□□□□□ -1.31
RTF1-205ENST00000558298 OR5B12Q96R08 314 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 CHODLQ9H9P2 273 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 CDH20Q9HBT6 801 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 OBP2BQ9NPH6 170 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 GPR84Q9NQS5 396 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 WSB1Q9Y6I7 421 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 R4GMQ9 66 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 CADP27708 2225 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 IGHV3-15A0A0B4J1V0 119 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 MEIS3P1A6NDR6 274 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 MSGN1A6NI15 193 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 C9JQL5 133 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 K7N7A8 449 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 PLPP3O14495 311 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 CDC14BO60729 498 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 PITX3O75364 302 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 MRPL33O75394 65 aaKnown RBP6.87□□□□□ -1.31
RTF1-205ENST00000558298 MMP23AO75900 390 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 CDS2O95674 445 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 TRGC2P03986 189 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 SOD3P08294 240 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 ZNF43P17038 809 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 AMY2BP19961 511 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 NTF4P34130 210 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 NPY4RP50391 375 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 ZNF133P52736 654 aaPredicted RBP6.87□□□□□ -1.31
RTF1-205ENST00000558298 LCN2P80188 198 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 RPL19P84098 196 aaKnown RBP6.87□□□□□ -1.31
RTF1-205ENST00000558298 PAX5Q02548 391 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 RAB35Q15286 201 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 TESK1Q15569 626 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 KCNMB1Q16558 191 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 TMEM183BQ1AE95 376 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 C3orf36Q3SXR2 165 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 TIMM23BQ5SRD1 257 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 KCNIP4Q6PIL6 250 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 FAM185AQ8N0U4 392 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 TMEM123Q8N131 208 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 FAM169BQ8N8A8 192 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 CCDC71LQ8N9Z2 235 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 C22orf15Q8WYQ4 148 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 MRPL24Q96A35 216 aaKnown RBP6.87□□□□□ -1.31
RTF1-205ENST00000558298 ANAPC16Q96DE5 110 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 POM121Q96HA1 1249 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 C20orf144Q9BQM9 153 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 AGMATQ9BSE5 352 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 CABLES2Q9BTV7 478 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 TMEM208Q9BTX3 173 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 C5orf66Q9H5L9 145 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 ELOVL3Q9HB03 270 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 CRLF2Q9HC73 371 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 CRIM1Q9NZV1 1036 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 ZFP30Q9Y2G7 519 aa6.87□□□□□ -1.31
RTF1-205ENST00000558298 YLPM1P49750 1951 aaKnown RBP6.87□□□□□ -1.31
RTF1-205ENST00000558298 CCDC168Q8NDH2 2452 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 CREBBPQ92793 2442 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 A6NNC1 897 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 ZNF732B4DXR9 585 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 MS4A18H0YCH9 400 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 HSD17B6O14756 317 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 GEMIN2O14893 280 aaKnown RBP6.86□□□□□ -1.31
RTF1-205ENST00000558298 SFTPBP07988 381 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 SRP19P09132 144 aaKnown RBP6.86□□□□□ -1.31
RTF1-205ENST00000558298 NR2C1P13056 603 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 HIST1H1DP16402 221 aaKnown RBP6.86□□□□□ -1.31
RTF1-205ENST00000558298 IGHV1-2P23083 117 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 SRP14P37108 136 aaKnown RBP6.86□□□□□ -1.31
RTF1-205ENST00000558298 AKR1C3P42330 323 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 CTXN1P60606 82 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 PAFAH1B2P68402 229 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 TGFBR3Q03167 851 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 FAM27E3Q08E93 113 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 HIST3H3Q16695 136 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 MS4A18Q3C1V0 323 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 UEVLDQ8IX04 471 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 ZNF664Q8N3J9 261 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 PLPP7Q8NBV4 271 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 ADAD2Q8NCV1 583 aaKnown RBP6.86□□□□□ -1.31
RTF1-205ENST00000558298 NOXO1Q8NFA2 376 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 OR52N5Q8NH56 324 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 OR10J5Q8NHC4 309 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 FAM213BQ8TBF2 198 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms