RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 GLP1RP43220 463 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 SOX2P48431 317 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 GBX2P52951 348 aaPredicted RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 PPP5CP53041 499 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 PRRX1P54821 245 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 WNT4P56705 351 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 RPS25P62851 125 aaKnown RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 IFITM3Q01628 133 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 BDH1Q02338 343 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 RELQ04864 619 aaPredicted RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 MLLT11Q13015 90 aaPredicted RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 KISS1Q15726 138 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 BAK1Q16611 211 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 LTC4SQ16873 150 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 MAJINQ3KP22 176 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 PAN3Q58A45 887 aaKnown RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 KHDC1LQ5JSQ8 128 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 TOR2AQ5JU69 321 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 Q6P435 159 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 RTN4RL2Q86UN3 420 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 SAXO1Q8IYX7 474 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 CHST4Q8NCG5 386 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 OR5AK2Q8NH90 309 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 MRAPQ8TCY5 172 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 S100ZQ8WXG8 99 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 CORO2AQ92828 525 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 TMEM203Q969S6 136 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 COQ2Q96H96 371 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 SLC25A33Q9BSK2 321 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 PPIL3Q9H2H8 161 aaKnown RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 SEPSECSQ9HD40 501 aaKnown RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 NDUFB11Q9NX14 153 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 OR6C3Q9NZP0 311 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 CCDC59Q9P031 241 aaKnown RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 KIF25Q9UIL4 384 aa5.35□□□□□ -1.55
PSEN1-216ENST00000556066 EXOSC1Q9Y3B2 195 aaKnown RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 CHTOPQ9Y3Y2 248 aaKnown RBP5.35□□□□□ -1.55
PSEN1-216ENST00000556066 KBTBD11-OT1A0A1B0GTJ5 212 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 TCRBV4S1A1TA0A5B7 111 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 ZNF729A6NN14 1252 aaPredicted RBP5.34□□□□□ -1.55
PSEN1-216ENST00000556066 BUB1B-PAK6H3BSN5 160 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CTDSP2O14595 271 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 PIN1P1O15428 100 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 IGLV1-47P01700 117 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CLEC3BP05452 202 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CSN2P05814 226 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 MYL12AP19105 171 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 RAB3AP20336 220 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 LMO1P25800 156 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CD34P28906 385 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 ZP1P60852 638 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 TPBGQ13641 420 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 HES1Q14469 280 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CDK5R1Q15078 307 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 RSU1Q15404 277 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 C17orf58Q2M2W7 97 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 HLA-DRB5Q30154 266 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 UTF1Q5T230 341 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 TPTE2P1Q5T6R2 138 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 KPRPQ5T749 579 aaPredicted RBP5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CCDC144NLQ6NUI1 221 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 Q6ZPA2 131 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 LINC00299Q6ZSB3 139 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 C16orf82Q7Z2V1 217 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 SYS1Q8N2H4 156 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CENPSQ8N2Z9 138 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 PARP16Q8N5Y8 322 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 ZNF565Q8N9K5 539 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 ZNF485Q8NCK3 441 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 OR51A2Q8NGJ7 313 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 OR10K1Q8NGX5 313 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 RFESDQ8TAC1 157 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 WIPF2Q8TF74 440 aaPredicted RBP5.34□□□□□ -1.55
PSEN1-216ENST00000556066 TNFAIP8L1Q8WVP5 186 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 LEAP2Q969E1 77 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 TOMM40LQ969M1 308 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 RPEQ96AT9 228 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CREB3L1Q96BA8 519 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 PHF21AQ96BD5 680 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 RNF125Q96EQ8 232 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CPNE2Q96FN4 548 aaPredicted RBP5.34□□□□□ -1.55
PSEN1-216ENST00000556066 BARHL1Q9BZE3 327 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 C6orf62Q9GZU0 229 aaPredicted RBP5.34□□□□□ -1.55
PSEN1-216ENST00000556066 RHOFQ9HBH0 211 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 ISYNA1Q9NPH2 558 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 TXNL4BQ9NX01 149 aaKnown RBP5.34□□□□□ -1.55
PSEN1-216ENST00000556066 CALYQ9NYX4 217 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 SSR3Q9UNL2 185 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 COL7A1Q02388 2944 aa5.34□□□□□ -1.55
PSEN1-216ENST00000556066 TRAV39A0A0B4J263 110 aa5.33□□□□□ -1.56
PSEN1-216ENST00000556066 TRAV24A0A0B4J272 114 aa5.33□□□□□ -1.56
PSEN1-216ENST00000556066 NOTOA8MTQ0 251 aa5.33□□□□□ -1.56
PSEN1-216ENST00000556066 GABRPO00591 440 aa5.33□□□□□ -1.56
PSEN1-216ENST00000556066 OR2F2O95006 317 aa5.33□□□□□ -1.56
PSEN1-216ENST00000556066 CDRT1O95170 752 aa5.33□□□□□ -1.56
PSEN1-216ENST00000556066 CD2P06729 351 aa5.33□□□□□ -1.56
PSEN1-216ENST00000556066 FAM106CPP0CH98 169 aa5.33□□□□□ -1.56
PSEN1-216ENST00000556066 IGLL1P15814 213 aa5.33□□□□□ -1.56
PSEN1-216ENST00000556066 PSMA1P25786 263 aaKnown RBP5.33□□□□□ -1.56
PSEN1-216ENST00000556066 CD40LGP29965 261 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms