RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CCDC124Q96CT7 223 aaKnown RBP2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 PRO3102Q9H379 93 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 TRIM45Q9H8W5 580 aaPredicted RBP2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 PLEKHA1Q9HB21 404 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 MGAMO43451 1857 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 TEP1Q99973 2627 aaKnown RBP2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 LAMA4Q16363 1823 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 KIAA1671Q9BY89 1806 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 DNAH12Q6ZR08 3092 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 CFAP54Q96N23 3096 aa2.79□□□□□ -1.96
CKS1BP1-201ENST00000555221 GCN1Q92616 2671 aaKnown RBP2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 BPTFQ12830 3046 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 NCOR1O75376 2440 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 IGKV2-24A0A0C4DH68 120 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 A0A1B0GW15 77 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 RBFOX3A6NFN3 312 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 IGLL5B9A064 214 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 C5orf67F2Z3F1 127 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 K7EPK0 472 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 GYG2O15488 501 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 CECR9P0C854 216 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 INAFM2P0DMQ5 153 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 PTHLHP12272 177 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 ELK4P28324 431 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 CD52P31358 61 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 GTF2BQ00403 316 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 GPR176Q14439 515 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 ACTBL2Q562R1 376 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 ZNF720Q7Z2F6 126 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 TMEM144Q7Z5S9 345 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 OR4C13Q8NGP0 309 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 OR6K3Q8NGY3 331 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 CPB2Q96IY4 423 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 VSIRQ9H7M9 311 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 METTL8Q9H825 291 aaKnown RBP2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 TMBIM4Q9HC24 238 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 NXT1Q9UKK6 140 aaKnown RBP2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 SEC16AO15027 2179 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 MYO9BQ13459 2157 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 HTTP42858 3142 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 MYO18BQ8IUG5 2567 aa2.78□□□□□ -1.96
CKS1BP1-201ENST00000555221 MYH6P13533 1939 aa2.78□□□□□ -1.97
CKS1BP1-201ENST00000555221 LOXHD1Q8IVV2 1947 aa2.78□□□□□ -1.97
CKS1BP1-201ENST00000555221 PLXNB2O15031 1838 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 A0A0G2JMZ2 1700 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 ARL5CA6NH57 179 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 PLPP3O14495 311 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 CALUO43852 315 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 CST4P01036 141 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 IGHG2P01859 326 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 TNNC2P02585 160 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 SCGB1C2P0DMR2 95 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 MLNP12872 115 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 RPA3P35244 121 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 GCLMP48507 274 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 KCNJ3P48549 501 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 MGAT3Q09327 533 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 ENDOGQ14249 297 aaKnown RBP2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZNF235Q14590 738 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZNF773Q6PK81 442 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 GALNT10Q86SR1 603 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 TMEM161BQ8NDZ6 487 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 SCGB1C1Q8TD33 95 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 C2orf15Q8WU43 125 aaKnown RBP2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 ANKRD36BP1Q96IX9 119 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 BIRC8Q96P09 236 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 PITX2Q99697 317 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 ANAPC13Q9BS18 74 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZNF492Q9P255 531 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 CYB5R1Q9UHQ9 305 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 USH1CQ9Y6N9 552 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 SCN10AQ9Y5Y9 1956 aa2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 COL11A1P12107 1806 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP1-201ENST00000555221 TMEM131Q92545 1883 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 PLXNA1Q9UIW2 1896 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 GOLGA8IPA6NC78 632 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 K7ERS5 55 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 CETN3O15182 167 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 UBDO15205 165 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 SLC16A4O15374 487 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 YKT6O15498 198 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 KCNE1P15382 129 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 LCN1P31025 176 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 GTF2H1P32780 548 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 HADHBP55084 474 aaKnown RBP2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 TPM4P67936 248 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 FMODQ06828 376 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 TMED1Q13445 227 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 TRIP13Q15645 432 aaPredicted RBP2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 TPGS1Q6ZTW0 290 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 PAGE2Q7Z2X7 111 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 TMEM86AQ8N2M4 240 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 ACBD4Q8NC06 268 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 IFT81Q8WYA0 676 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 CCL17Q92583 94 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZMYND19Q96E35 227 aaPredicted RBP2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 OR2V2Q96R30 315 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 APOL4Q9BPW4 351 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 PLA2G12AQ9BZM1 189 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 C14orf166Q9Y224 244 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms