RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RAB3CQ96E17 227 aa19■□□□□ 0.63
TDP1-205ENST00000553527 ARHGAP5-AS1Q96IT6 56 aa19■□□□□ 0.63
TDP1-205ENST00000553527 FAAP24Q9BTP7 215 aa19■□□□□ 0.63
TDP1-205ENST00000553527 HSF4Q9ULV5 492 aa19■□□□□ 0.63
TDP1-205ENST00000553527 DPPA5A6NC42 116 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 A6NDX4 124 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 BUB1B-PAK6H3BSN5 160 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 CA11O75493 328 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 CD34P28906 385 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 GNG10P50151 68 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 MZT2AQ6P582 158 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 LIAT1Q6ZQX7 453 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 OR9G1Q8NH87 305 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 PHF21AQ96BD5 680 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 CYYR1Q96J86 154 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 PECRQ9BY49 303 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 NPFFR1Q9GZQ6 430 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 COMMD3Q9UBI1 195 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 PITPNC1Q9UKF7 332 aa18.99■□□□□ 0.63
TDP1-205ENST00000553527 A0A087X0M5 115 aa18.98■□□□□ 0.63
TDP1-205ENST00000553527 A0A1B0GX30 115 aa18.98■□□□□ 0.63
TDP1-205ENST00000553527 RAB27BO00194 218 aa18.98■□□□□ 0.63
TDP1-205ENST00000553527 TMEM50BP56557 158 aa18.98■□□□□ 0.63
TDP1-205ENST00000553527 HLA-DRB5Q30154 266 aa18.98■□□□□ 0.63
TDP1-205ENST00000553527 PLAC9Q5JTB6 97 aa18.98■□□□□ 0.63
TDP1-205ENST00000553527 ARL11Q969Q4 196 aa18.98■□□□□ 0.63
TDP1-205ENST00000553527 CITED1Q99966 193 aa18.98■□□□□ 0.63
TDP1-205ENST00000553527 NBEAL1Q6ZS30 2694 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 A0A075B6Q4 140 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 NPIPB11E5RHQ5 1161 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 MT-ND4P03905 459 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 HIST1H1DP16402 221 aaKnown RBP18.97■□□□□ 0.63
TDP1-205ENST00000553527 GZMHP20718 246 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 CEACAM3P40198 252 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 KIR2DS4P43632 304 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 OR4K15Q8NH41 348 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 OR2T6Q8NHC8 308 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 MMP28Q9H239 520 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 TRAPPC2LQ9UL33 140 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 PSG11Q9UQ72 335 aa18.97■□□□□ 0.63
TDP1-205ENST00000553527 A0A1W2PPE3 182 aa18.96■□□□□ 0.63
TDP1-205ENST00000553527 J3QR06 171 aa18.96■□□□□ 0.63
TDP1-205ENST00000553527 BRS3P32247 399 aa18.96■□□□□ 0.63
TDP1-205ENST00000553527 DYNLT3P51808 116 aa18.96■□□□□ 0.63
TDP1-205ENST00000553527 HABP2Q14520 560 aaPredicted RBP18.96■□□□□ 0.63
TDP1-205ENST00000553527 TPTE2P1Q5T6R2 138 aa18.96■□□□□ 0.63
TDP1-205ENST00000553527 CREB3L1Q96BA8 519 aa18.96■□□□□ 0.63
TDP1-205ENST00000553527 DCUN1D5Q9BTE7 237 aa18.96■□□□□ 0.63
TDP1-205ENST00000553527 CHMP1AQ9HD42 196 aaPredicted RBP18.96■□□□□ 0.63
TDP1-205ENST00000553527 AK3Q9UIJ7 227 aa18.96■□□□□ 0.63
TDP1-205ENST00000553527 A0A0A6YYH2 397 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 A6NJ64 397 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 MFNGO00587 321 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 GNB3P16520 340 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 ARHGDIBP52566 201 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 ARL6IP1Q15041 203 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 PRR31Q5SQ13 230 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 GAPTQ8N292 157 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 PRR18Q8N4B5 295 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 ABCG5Q9H222 651 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 RANBP3Q9H6Z4 567 aaPredicted RBP18.95■□□□□ 0.62
TDP1-205ENST00000553527 LINC00574Q9H8X3 128 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 DIABLOQ9NR28 239 aa18.95■□□□□ 0.62
TDP1-205ENST00000553527 IGHV3-43A0A0B4J1X8 118 aa18.94■□□□□ 0.62
TDP1-205ENST00000553527 SDCBPO00560 298 aaPredicted RBP18.94■□□□□ 0.62
TDP1-205ENST00000553527 IGHV3-43DP0DP04 118 aa18.94■□□□□ 0.62
TDP1-205ENST00000553527 VSIG10L2P0DP72 767 aa18.94■□□□□ 0.62
TDP1-205ENST00000553527 MRPS15P82914 257 aaKnown RBP18.94■□□□□ 0.62
TDP1-205ENST00000553527 ARSJQ5FYB0 599 aaPredicted RBP18.94■□□□□ 0.62
TDP1-205ENST00000553527 HIST2H2BDQ6DRA6 164 aa18.94■□□□□ 0.62
TDP1-205ENST00000553527 MRPL30Q8TCC3 161 aaKnown RBP18.94■□□□□ 0.62
TDP1-205ENST00000553527 RPEQ96AT9 228 aa18.94■□□□□ 0.62
TDP1-205ENST00000553527 DGCR14Q96DF8 476 aaKnown RBP18.94■□□□□ 0.62
TDP1-205ENST00000553527 S100A16Q96FQ6 103 aaKnown RBP18.94■□□□□ 0.62
TDP1-205ENST00000553527 CMTM3Q96MX0 182 aa18.94■□□□□ 0.62
TDP1-205ENST00000553527 C12orf4Q9NQ89 552 aa18.94■□□□□ 0.62
TDP1-205ENST00000553527 AMMECR1Q9Y4X0 333 aaPredicted RBP18.94■□□□□ 0.62
TDP1-205ENST00000553527 SERPINE3A8MV23 424 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 LY6LH3BQJ8 138 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 C15orf65H3BRN8 121 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 HPGDSO60760 199 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 APOA1P02647 267 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 EIF4EP06730 217 aaKnown RBP18.93■□□□□ 0.62
TDP1-205ENST00000553527 CD3GP09693 182 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 MNDAP41218 407 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 BLCAPP62952 87 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 C6orf183Q5T699 404 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 FAM53AQ6NSI3 398 aaPredicted RBP18.93■□□□□ 0.62
TDP1-205ENST00000553527 C11orf44Q8N8P7 122 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 OR10A7Q8NGE5 316 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 OR10X1Q8NGY0 326 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 TOMM40LQ969M1 308 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 CMSS1Q9BQ75 279 aaKnown RBP18.93■□□□□ 0.62
TDP1-205ENST00000553527 HDHD3Q9BSH5 251 aaPredicted RBP18.93■□□□□ 0.62
TDP1-205ENST00000553527 RIMS4Q9H426 269 aaPredicted RBP18.93■□□□□ 0.62
TDP1-205ENST00000553527 KCNK7Q9Y2U2 307 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 PKD1L1Q8TDX9 2849 aa18.93■□□□□ 0.62
TDP1-205ENST00000553527 TET2Q6N021 2002 aaPredicted RBP18.92■□□□□ 0.62
TDP1-205ENST00000553527 ORC5O43913 435 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 GSTP1P09211 210 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms