RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 MOB1BQ7L9L4 216 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 OR1L1Q8NH94 360 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 UBALD1Q8TB05 177 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 CHMP1AQ9HD42 196 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-204ENST00000553324 JPT1Q9UK76 154 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 STUB1Q9UNE7 303 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 TRBV6-6A0A0A6YYG2 114 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 IGHV3-43A0A0B4J1X8 118 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 A0A1W2PPE3 182 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 HSD17B6O14756 317 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 SOCS1O15524 211 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 YPEL1O60688 119 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 NAPSAO96009 420 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 IGHV3-43DP0DP04 118 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 VSIG10L2P0DP72 767 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 VEGFCP49767 419 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 CLDN12P56749 244 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 HES1Q14469 280 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 MORN2Q502X0 79 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 HES5Q5TA89 166 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 TREML4Q6UXN2 200 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 TPRA1Q86W33 373 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 DRAM1Q8N682 238 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 KLHDC1Q8N7A1 406 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 OR56B4Q8NH76 319 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 YPEL2Q96QA6 119 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 KCNK15Q9H427 330 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 SERTAD4Q9NUC0 356 aa12.27□□□□□ -0.45
SHMT2-204ENST00000553324 A0A0A6YYD4 124 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 IGHV1-3A0A0C4DH29 117 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 METTL21EPA6NDL7 271 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 LDLRAD4O15165 306 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 SNRNP70P08621 437 aaKnown RBP12.26□□□□□ -0.45
SHMT2-204ENST00000553324 RAB6AP20340 208 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 VDAC2P45880 294 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-204ENST00000553324 ZNF137PP52743 207 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 HABP2Q14520 560 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-204ENST00000553324 C2orf68Q2NKX9 166 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 CT45A1Q5HYN5 189 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 ZNF880Q6PDB4 577 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 MOB3BQ86TA1 216 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 OR10V1Q8NGI7 309 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 CT45A3Q8NHU0 189 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 CFHR4Q92496 578 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 ST6GALNAC6Q969X2 333 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 PTX4Q96A99 478 aa12.26□□□□□ -0.45
SHMT2-204ENST00000553324 TXNL4BQ9NX01 149 aaKnown RBP12.26□□□□□ -0.45
SHMT2-204ENST00000553324 TMEM272A0A1B0GTI8 110 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 FOXI3A8MTJ6 420 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-204ENST00000553324 NOTOA8MTQ0 251 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 TMEM11P17152 192 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 CD1BP29016 333 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 ZNF134P52741 427 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 TMEM50BP56557 158 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 OR10A3P58181 314 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 MRPS15P82914 257 aaKnown RBP12.25□□□□□ -0.45
SHMT2-204ENST00000553324 EBI3Q14213 229 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 DIAPH2-AS1Q14236 149 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 HMGN3Q15651 99 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 ABCA11PQ4W5N1 156 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 TGIF2LXQ8IUE1 241 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 ZNF439Q8NDP4 499 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 RTN4IP1Q8WWV3 396 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-204ENST00000553324 KCTD7Q96MP8 289 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 WNT10AQ9GZT5 417 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 MMP27Q9H306 513 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 GHITMQ9H3K2 345 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 C12orf4Q9NQ89 552 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 AK3Q9UIJ7 227 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 MOB4Q9Y3A3 225 aa12.25□□□□□ -0.45
SHMT2-204ENST00000553324 SHISA3A0PJX4 238 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 FGF16O43320 207 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 IGKV1D-33P01593 117 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 IGKV1-33P01594 117 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 GADD45AP24522 165 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 ARL6IP1Q15041 203 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 OR52L2PQ8NGH6 319 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 OR2T10Q8NGZ9 312 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 SETD6Q8TBK2 473 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 IL1F10Q8WWZ1 152 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 RAB3CQ96E17 227 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 ARHGAP5-AS1Q96IT6 56 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 CMSS1Q9BQ75 279 aaKnown RBP12.24□□□□□ -0.45
SHMT2-204ENST00000553324 CENPOQ9BU64 300 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 ABHD14AQ9BUJ0 271 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 PECRQ9BY49 303 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 VCX3AQ9NNX9 186 aa12.24□□□□□ -0.45
SHMT2-204ENST00000553324 NBEAL1Q6ZS30 2694 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 A0A087WXM4 84 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 SLC31A2O15432 143 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 LANCL1O43813 399 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 TNFAIP8O95379 198 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 CSF1P09603 554 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 ZBTB25P24278 435 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 REG1BP48304 166 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 NEDD8Q15843 81 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 FAM53AQ6NSI3 398 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-204ENST00000553324 Q6ZS46 218 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 CENPVQ7Z7K6 275 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms