RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 GPX5O75715 221 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 CRTAPO75718 401 aaPredicted RBP8.96□□□□□ -0.98
NEK3-204ENST00000552973 CNTFRP26992 372 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 GNMTQ14749 295 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 MMDQ15546 238 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 LRRC36Q1X8D7 754 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 ZNF260Q3ZCT1 412 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 YIF1BQ5BJH7 314 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 C6orf183Q5T699 404 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 C10orf67Q8IYJ2 551 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 FAM71E2Q8N5Q1 922 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 OR8H1Q8NGG4 311 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 CYGBQ8WWM9 190 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 GGHQ92820 318 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 FAM46BQ96A09 425 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 TMEM80Q96HE8 168 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 PGLYRP3Q96LB9 341 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 KLK15Q9H2R5 256 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 TAF9BQ9HBM6 251 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 SPACA1Q9HBV2 294 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 OR2S2Q9NQN1 319 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 CHCHD3Q9NX63 227 aaKnown RBP8.96□□□□□ -0.98
NEK3-204ENST00000552973 SCOCQ9UIL1 159 aa8.96□□□□□ -0.98
NEK3-204ENST00000552973 TRBV5-7A0A0A0MS05 114 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 IRGMA1A4Y4 181 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 G3V318 75 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 TXNL1O43396 289 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 IGHG4P01861 327 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 MGMTP16455 207 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 PSMB8P28062 276 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 ZNF137PP52743 207 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 GP2P55259 537 aaKnown RBP8.95□□□□□ -0.98
NEK3-204ENST00000552973 LSAMPQ13449 338 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 DCTN2Q13561 401 aaKnown RBP8.95□□□□□ -0.98
NEK3-204ENST00000552973 Q3ZCU0 254 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 MORN2Q502X0 79 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 NKAPLQ5M9Q1 402 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 SIGIRRQ6IA17 410 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 RNF152Q8N8N0 203 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 C4orf3Q8WVX3 66 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 GNB4Q9HAV0 340 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 RAB9BQ9NP90 201 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 U3KQK5 164 aa8.95□□□□□ -0.98
NEK3-204ENST00000552973 LY86O95711 162 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 IGF1P05019 195 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 NHLRC4P0CG21 123 aaPredicted RBP8.94□□□□□ -0.98
NEK3-204ENST00000552973 FUT3P21217 361 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 PPP1CCP36873 323 aaKnown RBP8.94□□□□□ -0.98
NEK3-204ENST00000552973 CAPGP40121 348 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 ACTBP60709 375 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 KIAA0141Q14154 515 aaPredicted RBP8.94□□□□□ -0.98
NEK3-204ENST00000552973 DOC2BQ14184 412 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 TMEM65Q6PI78 240 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 ODF3L1Q8IXM7 274 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 ZNF485Q8NCK3 441 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 OR1N2Q8NGR9 330 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 MRPL30Q8TCC3 161 aaKnown RBP8.94□□□□□ -0.98
NEK3-204ENST00000552973 MRPS24Q96EL2 167 aaKnown RBP8.94□□□□□ -0.98
NEK3-204ENST00000552973 RDH12Q96NR8 316 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 NABP2Q9BQ15 211 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 MRPL20Q9BYC9 149 aaKnown RBP8.94□□□□□ -0.98
NEK3-204ENST00000552973 PARP11Q9NR21 331 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 KCNIP1Q9NZI2 227 aa8.94□□□□□ -0.98
NEK3-204ENST00000552973 RYR3Q15413 4870 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 ATP6V0E1O15342 81 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 LANCL1O43813 399 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 SC5DO75845 299 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 OR5H8P0DN80 308 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 CELP19835 753 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 FSTP19883 344 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 PPIFP30405 207 aaKnown RBP8.93□□□□□ -0.98
NEK3-204ENST00000552973 OR3A3P47888 321 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 GNB1P62873 340 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 ST3GAL4Q11206 333 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 MED21Q13503 144 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 FHL3Q13643 280 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 ASPHD1Q5U4P2 390 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 OR10K2Q6IF99 312 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 TRAT1Q6PIZ9 186 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 GAPTQ8N292 157 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 ZNF491Q8N8L2 437 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 CASTOR1Q8WTX7 329 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 Q96M66 194 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 DERL3Q96Q80 235 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 ZNF251Q9BRH9 671 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 ABHD14AQ9BUJ0 271 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 ANKRD60Q9BZ19 345 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 ALX4Q9H161 411 aaPredicted RBP8.93□□□□□ -0.98
NEK3-204ENST00000552973 OR51J1Q9H342 316 aa8.93□□□□□ -0.98
NEK3-204ENST00000552973 MBNL3Q9NUK0 354 aaKnown RBP8.93□□□□□ -0.98
NEK3-204ENST00000552973 IGHV7-81A0A0B4J1V7 117 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 CA11O75493 328 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 BLVRBP30043 206 aaPredicted RBP8.92□□□□□ -0.98
NEK3-204ENST00000552973 INSL4Q14641 139 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 TMEM30BQ3MIR4 351 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 TTC23Q5W5X9 447 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 STEAP3Q658P3 488 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 LIN54Q6MZP7 749 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 LYPD6Q86Y78 171 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 DCUN1D4Q92564 292 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms