RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 RWDD4Q6NW29 188 aaKnown RBP3.65□□□□□ -1.83
CPSF6-206ENST00000550987 OR2W3Q7Z3T1 314 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 BOD1L2Q8IYS8 172 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 PGAM4Q8N0Y7 254 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 CCDC42Q96M95 316 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 PACRGQ96M98 296 aaPredicted RBP3.65□□□□□ -1.83
CPSF6-206ENST00000550987 NUDT9Q9BW91 350 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 MRPS26Q9BYN8 205 aaKnown RBP3.65□□□□□ -1.83
CPSF6-206ENST00000550987 OR51B5Q9H339 312 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 RDH14Q9HBH5 336 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 KIF25-AS1Q9Y6Z4 181 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 ARID1AO14497 2285 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 YLPM1P49750 1951 aaKnown RBP3.65□□□□□ -1.83
CPSF6-206ENST00000550987 PLECQ15149 4684 aaKnown RBP3.65□□□□□ -1.83
CPSF6-206ENST00000550987 IGHV5-10-1A0A0J9YXX1 117 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 BIRC5O15392 142 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 GABARAPO95166 117 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 RD3LP0DJH9 198 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 CTSEP14091 401 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 RCC1P18754 421 aaPredicted RBP3.64□□□□□ -1.83
CPSF6-206ENST00000550987 F8A1P23610 371 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 CXCL5P42830 114 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 MAGEA12P43365 314 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 UBE2AP49459 152 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 SPA17Q15506 151 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 TMEM249Q2WGJ8 235 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 BSXQ3C1V8 233 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 PDZD11Q5EBL8 140 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 GCSAMLQ5JQS6 135 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 RBM48Q5RL73 367 aaKnown RBP3.64□□□□□ -1.83
CPSF6-206ENST00000550987 CDRT4Q8N9R6 151 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 ATP6V1C2Q8NEY4 427 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 OR51G1Q8NGK1 321 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 ZFP90Q8TF47 636 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 NELFBQ8WX92 580 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 RORBQ92753 470 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 HGDQ93099 445 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 ZIM3Q96PE6 472 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 TEAD3Q99594 435 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 GPR21Q99679 349 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 ING2Q9H160 280 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 CDC42EP4Q9H3Q1 356 aaKnown RBP3.64□□□□□ -1.83
CPSF6-206ENST00000550987 EDA2RQ9HAV5 297 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 PATZ1Q9HBE1 687 aaKnown RBP3.64□□□□□ -1.83
CPSF6-206ENST00000550987 SIRT7Q9NRC8 400 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 FGFR1OP2Q9NVK5 253 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 RHBDL2Q9NX52 303 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 OR51B4Q9Y5P0 310 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 CADP27708 2225 aa3.64□□□□□ -1.83
CPSF6-206ENST00000550987 SCN2AQ99250 2005 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 PLCE1Q9P212 2302 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 NKX2-6A6NCS4 301 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ATP8B1O43520 1251 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 SC5DO75845 299 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 AQP8O94778 261 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 TNFAIP8O95379 198 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 RHOCP08134 193 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 COX5BP10606 129 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ERGP11308 486 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ADRB3P13945 408 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 UCHL3P15374 230 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 RAB5AP20339 215 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 PSMB5P28074 263 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 TGFBR2P37173 567 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 IDH3GP51553 393 aaPredicted RBP3.63□□□□□ -1.83
CPSF6-206ENST00000550987 P2RX1P51575 399 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 AP1S2P56377 157 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ZNF121P58317 390 aaPredicted RBP3.63□□□□□ -1.83
CPSF6-206ENST00000550987 OR2B8PP59922 312 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 UBE2NP61088 152 aaKnown RBP3.63□□□□□ -1.83
CPSF6-206ENST00000550987 SNRPFP62306 86 aaKnown RBP3.63□□□□□ -1.83
CPSF6-206ENST00000550987 TFF3Q07654 80 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ADIGQ0VDE8 80 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 STX4Q12846 297 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 BNIP2Q12982 314 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 PTGES3Q15185 160 aaKnown RBP3.63□□□□□ -1.83
CPSF6-206ENST00000550987 RGNQ15493 299 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 C6orf52Q5T4I8 152 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 KCTD16Q68DU8 428 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 DNAJC24Q6P3W2 148 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 DNM1P34Q6PK57 102 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ARL9Q6T311 187 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ZNF429Q86V71 674 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 GKN2Q86XP6 184 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 HS3ST5Q8IZT8 346 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ZFP82Q8N141 532 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 STPG2Q8N412 459 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 RIBC1Q8N443 379 aaPredicted RBP3.63□□□□□ -1.83
CPSF6-206ENST00000550987 RNF175Q8N4F7 328 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 TMEM156Q8N614 296 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 TMEM251Q8N6I4 163 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 DUSP18Q8NEJ0 188 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 FDCSPQ8NFU4 85 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 OR2V1Q8NHB1 315 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 DYNC2LI1Q8TCX1 351 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 IFT81Q8WYA0 676 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 RPEQ96AT9 228 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 RCN3Q96D15 328 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 STACQ99469 402 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 DDA1Q9BW61 102 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms