RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 C5orf24Q7Z6I8 188 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 APH1BQ8WW43 257 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 DCUN1D4Q92564 292 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 RITA1Q96K30 269 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF184Q99676 751 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-205ENST00000550013 ISYNA1Q9NPH2 558 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 GAR1Q9NY12 217 aaKnown RBP11.96□□□□□ -0.49
RAB5C-205ENST00000550013 ETAA1Q9NY74 926 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 MCRIP1C9JLW8 97 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 LANCL1O43813 399 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 ATP5HO75947 161 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 IGLV1-40P01703 118 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 RCC1P18754 421 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-205ENST00000550013 ETV1P50549 477 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 RIPK1Q13546 671 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 GNMTQ14749 295 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 CCDC58Q4VC31 144 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 C6orf183Q5T699 404 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 OR2G6Q5TZ20 316 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 MRPL20Q9BYC9 149 aaKnown RBP11.95□□□□□ -0.5
RAB5C-205ENST00000550013 ALX4Q9H161 411 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-205ENST00000550013 OR51J1Q9H342 316 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 PARP11Q9NR21 331 aa11.95□□□□□ -0.5
RAB5C-205ENST00000550013 RPL36Q9Y3U8 105 aaKnown RBP11.95□□□□□ -0.5
RAB5C-205ENST00000550013 EPPK1P58107 5090 aaKnown RBP11.95□□□□□ -0.5
RAB5C-205ENST00000550013 TRAV8-7A0A075B6U6 113 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 IGHV7-81A0A0B4J1V7 117 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 OVOL1O14753 267 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 ZNF780AO75290 641 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-205ENST00000550013 IGFBP3P17936 291 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-205ENST00000550013 BLVRBP30043 206 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-205ENST00000550013 ACTBP60709 375 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 SMN1Q16637 294 aaKnown RBP11.94□□□□□ -0.5
RAB5C-205ENST00000550013 TMEM30BQ3MIR4 351 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 FAM27D1Q5T7N8 215 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 RAB12Q6IQ22 244 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 ZNF429Q86V71 674 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 GAPTQ8N292 157 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 MUL1Q969V5 352 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 SLC29A1Q99808 456 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 CHCHD6Q9BRQ6 235 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 ANKRD60Q9BZ19 345 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 SPACA1Q9HBV2 294 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 FGF20Q9NP95 211 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-205ENST00000550013 MRPS28Q9Y2Q9 187 aaKnown RBP11.94□□□□□ -0.5
RAB5C-205ENST00000550013 PEX16Q9Y5Y5 336 aa11.94□□□□□ -0.5
RAB5C-205ENST00000550013 DNAH1Q9P2D7 4330 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 LYSTQ99698 3801 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 TRAV41A0A0B4J266 112 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 TRBV5-5A0A0J9YX44 114 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 LOC100130705A0A1B0GUX0 176 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 FAM90A10PA6NDY2 464 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 OGG1O15527 345 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 SAP30O75446 220 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 LALBAP00709 142 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 HLA-DRB1P01911 266 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 FRMD6-AS1P0C7T7 363 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 SPNP16150 400 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 PPP1CCP36873 323 aaKnown RBP11.93□□□□□ -0.5
RAB5C-205ENST00000550013 RAB9AP51151 201 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 SLURP1P55000 103 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 MORN2Q502X0 79 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 ODF3L1Q8IXM7 274 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 OR52L2PQ8NGH6 319 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 DLX4Q92988 240 aaPredicted RBP11.93□□□□□ -0.5
RAB5C-205ENST00000550013 SMIM19Q96E16 107 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 BANF2Q9H503 90 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 TAF9BQ9HBM6 251 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 RAB9BQ9NP90 201 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 OR2S2Q9NQN1 319 aa11.93□□□□□ -0.5
RAB5C-205ENST00000550013 UBE2QL1A1L167 161 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 WBP4O75554 376 aaKnown RBP11.92□□□□□ -0.5
RAB5C-205ENST00000550013 OR3A3P47888 321 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 NDPQ00604 133 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 GABPB1Q06547 395 aaPredicted RBP11.92□□□□□ -0.5
RAB5C-205ENST00000550013 GPR176Q14439 515 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 C5orf64Q2M2E5 130 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 STEAP3Q658P3 488 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 TRAT1Q6PIZ9 186 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 GLIPR1L1Q6UWM5 242 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 TMPRSS11AQ6ZMR5 421 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 JAGN1Q8N5M9 183 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 MINDY2Q8NBR6 621 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 CASTOR1Q8WTX7 329 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 GHSRQ92847 366 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 NABP2Q9BQ15 211 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 ZNF251Q9BRH9 671 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 ABHD14AQ9BUJ0 271 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 FAM53CQ9NYF3 392 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 FBXO7Q9Y3I1 522 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 STARD9Q9P2P6 4700 aa11.92□□□□□ -0.5
RAB5C-205ENST00000550013 CSMD3Q7Z407 3707 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 A0A1W2PPK0 400 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 TRIM64CA6NLI5 447 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 NBR2O15453 112 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 SOX15O60248 233 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 GPX5O75715 221 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 SC5DO75845 299 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 LYL1P12980 280 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 GP9P14770 177 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms