RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 DAD1P61803 113 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 FUT5Q11128 374 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 ENDOGQ14249 297 aaKnown RBP1.66□□□□□ -2.14
CCDC38-208ENST00000549876 GNA13Q14344 377 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 MMDQ15546 238 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 SPATA31B1PQ5VZV4 182 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 ELP2Q6IA86 826 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 CYHR1Q6ZMK1 362 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 OR8S1Q8NH09 359 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 OR51H1Q8NH63 302 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 OR10D3Q8NH80 312 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 ERMNQ8TAM6 284 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 C2orf15Q8WU43 125 aaKnown RBP1.66□□□□□ -2.14
CCDC38-208ENST00000549876 ANKRD7Q92527 254 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 RAB8BQ92930 207 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 TESCQ96BS2 214 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 GALMQ96C23 342 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 OPTNQ96CV9 577 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 REEP6Q96HR9 211 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 STACQ99469 402 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 MAP1LC3AQ9H492 121 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 TRIM45Q9H8W5 580 aaPredicted RBP1.66□□□□□ -2.14
CCDC38-208ENST00000549876 INIPQ9NRY2 104 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 PARVAQ9NVD7 372 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 TAS2R9Q9NYW1 312 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 ANKRD12Q6UB98 2062 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 DNMT1P26358 1616 aaKnown RBP1.66□□□□□ -2.14
CCDC38-208ENST00000549876 DOCK8Q8NF50 2099 aa1.65□□□□□ -2.14
CCDC38-208ENST00000549876 NLRC5Q86WI3 1866 aa1.65□□□□□ -2.14
CCDC38-208ENST00000549876 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.65□□□□□ -2.15
CCDC38-208ENST00000549876 IGHV3-21A0A0B4J1V1 117 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 ARGFXA6NJG6 315 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 IGLL5B9A064 214 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 F5H5P2 479 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.65□□□□□ -2.15
CCDC38-208ENST00000549876 H3BSA7 217 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 COPEO14579 308 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 KCNK2O95069 426 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 NRASP01111 189 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 HRASP01112 189 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 KRASP01116 189 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 LTAP01374 205 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 HLA-DRAP01903 254 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 HBZP02008 142 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 MLNP12872 115 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 MYL12AP19105 171 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 RPL12P30050 165 aaKnown RBP1.65□□□□□ -2.15
CCDC38-208ENST00000549876 TGFBR1P36897 503 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 RAP1GDS1P52306 607 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 ACTBP60709 375 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 CXCR4P61073 352 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 ACTG1P63261 375 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 BASP1P80723 227 aaKnown RBP1.65□□□□□ -2.15
CCDC38-208ENST00000549876 FMODQ06828 376 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 STX5Q13190 355 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 PDK2Q15119 407 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 EBPQ15125 230 aaKnown RBP1.65□□□□□ -2.15
CCDC38-208ENST00000549876 ACSM3Q53FZ2 586 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 AKIRIN2Q53H80 203 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 SYPL2Q5VXT5 272 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 ZBTB8OSQ8IWT0 167 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 AMN1Q8IY45 258 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 HS3ST5Q8IZT8 346 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 NATD1Q8N6N6 113 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 ZFP62Q8NB50 900 aaPredicted RBP1.65□□□□□ -2.15
CCDC38-208ENST00000549876 GPR32P1Q8NGA4 272 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 OR9I1Q8NGQ6 314 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 TMBIM1Q969X1 311 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 TLCD1Q96CP7 247 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 CMBLQ96DG6 245 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 PYURFQ96I23 114 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 OR7D2Q96RA2 312 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 TIPINQ9BVW5 301 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 OR51V1Q9H2C8 321 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 C3orf18Q9UK00 162 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 LTBP4Q8N2S1 1624 aa1.65□□□□□ -2.15
CCDC38-208ENST00000549876 KIAA1671Q9BY89 1806 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 LEUTXA8MZ59 168 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 K7ERS5 55 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 KCNK1O00180 336 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 MFNGO00587 321 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 CDRT1O95170 752 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 IL6P05231 212 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 ATP5G1P05496 136 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 CRYBA1P05813 215 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 IL3P08700 152 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 CTXN2P0C2S0 81 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 RPS12P25398 132 aaKnown RBP1.64□□□□□ -2.15
CCDC38-208ENST00000549876 DDTP30046 118 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 SLCO1A2P46721 670 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 PSMB3P49720 205 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 SULT1A2P50226 295 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 MRPS25P82663 173 aaKnown RBP1.64□□□□□ -2.15
CCDC38-208ENST00000549876 PPP1R1AQ13522 171 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 ZCWPW2Q504Y3 356 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 TRMT12Q53H54 448 aaKnown RBP1.64□□□□□ -2.15
CCDC38-208ENST00000549876 SPIN3Q5JUX0 258 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 TMEM31Q5JXX7 168 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 CLVS2Q5SYC1 327 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 HES3Q5TGS1 186 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms