RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TFF2Q03403 129 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 COL10A1Q03692 680 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 C1orf185Q5T7R7 199 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM54Q969K7 222 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 PACRGQ96M98 296 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-209ENST00000545689 IFNL4K9M1U5 179 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 PAGE4O60829 102 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 DAOP14920 347 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 SFTPA2Q8IWL1 248 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 DOK5Q9P104 306 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 M0QZK8 103 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 GGCTO75223 188 aaKnown RBP10.86□□□□□ -0.67
COL4A6-209ENST00000545689 PRDX2P32119 198 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 UCP3P55916 312 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM30BQ3MIR4 351 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 LBHQ53QV2 105 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-209ENST00000545689 DOLPP1Q86YN1 238 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 OR1L6Q8NGR2 347 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 RAB24Q969Q5 203 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 GSX1Q9H4S2 264 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-209ENST00000545689 OR5AC2Q9NZP5 309 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 TUBD1Q9UJT1 453 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 CRYBA1P05813 215 aa10.86□□□□□ -0.67
COL4A6-209ENST00000545689 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-209ENST00000545689 TRAV20A0A0B4J274 112 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 LGALS7P47929 136 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 ELOBQ15370 118 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 HARBI1Q96MB7 349 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 HELTA6NFD8 242 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 P01737 135 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 IGKV3-11P04433 115 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 HKR1P10072 659 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 P2RY4P51582 365 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 UCP2P55851 309 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM255AQ5JRV8 349 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 P2RX4Q99571 388 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 OR2J1Q9GZK6 312 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM191AQ9H0A3 160 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 OR51B2Q9Y5P1 312 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 PLXNA1Q9UIW2 1896 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 C16orf97H3BN30 126 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 FAM214BQ7L5A3 538 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 OR2T8A6NH00 312 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 M0R143 59 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 GOSR1O95249 250 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM252Q8N6L7 170 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 OR10C1Q96KK4 312 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM14DPA8MWL7 114 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 AHRRA9YTQ3 701 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 CYB5R3P00387 301 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-209ENST00000545689 HIST1H1EP10412 219 aaKnown RBP10.85□□□□□ -0.67
COL4A6-209ENST00000545689 CD1BP29016 333 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 AESQ08117 197 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 LRP11Q86VZ4 500 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 SAP25Q8TEE9 199 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 Q96M66 194 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 RASL11BQ9BPW5 248 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 ABHD14AQ9BUJ0 271 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 RSRP1Q9BUV0 290 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 SCN10AQ9Y5Y9 1956 aa10.85□□□□□ -0.67
COL4A6-209ENST00000545689 CDX4O14627 284 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-209ENST00000545689 NHLH1Q02575 133 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 NHLH2Q02577 135 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 ISOC2Q96AB3 205 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 OR2A4O95047 310 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 ORM1P02763 201 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 RCC1P18754 421 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-209ENST00000545689 KRTCAP3Q53RY4 240 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 SPNS3Q6ZMD2 512 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 SLC25A45Q8N413 288 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 TMEM251Q8N6I4 163 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 OR2A7Q96R45 310 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 ISLRO14498 428 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 MUC1P15941 1255 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-209ENST00000545689 OR10J1P30954 320 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 NPVFQ9HCQ7 196 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 PSME4Q14997 1843 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 M0R2Z0 102 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 SNCGO76070 127 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 Q8WTZ3 238 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 BRCA1P38398 1863 aaKnown RBP10.84□□□□□ -0.67
COL4A6-209ENST00000545689 PRR33A8MZF0 331 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 J3QR06 171 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 COX6A1P12074 109 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 RNF151Q2KHN1 245 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 OR1K1Q8NGR3 316 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 OR4X1Q8NH49 305 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 VPS25Q9BRG1 176 aa10.84□□□□□ -0.67
COL4A6-209ENST00000545689 GNG7O60262 68 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 NEURL1O76050 574 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 SSMEM1Q8WWF3 244 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 A0A1W2PR77 199 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 K7N7A8 449 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 CD8AP01732 235 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 UBE2V2Q15819 145 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 CCDC144NLQ6NUI1 221 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 SNX22Q96L94 193 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 BET1LQ9NYM9 111 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 PILRBQ9UKJ0 227 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 SMPD2O60906 423 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms