RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 IGHV3-43A0A0B4J1X8 118 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 IFITM5A6NNB3 132 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 TIMM23O14925 209 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 SLC31A2O15432 143 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 SPINT2O43291 252 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 FAM106CPP0CH98 169 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 IGHV3-43DP0DP04 118 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 PLA2G7Q13093 441 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 HERPUD1Q15011 391 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 HMGN3Q15651 99 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 RAB11BQ15907 218 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 KCTD21Q4G0X4 260 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 MORN2Q502X0 79 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 NKAPLQ5M9Q1 402 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 TREML4Q6UXN2 200 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 OR8H3Q8N146 312 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 OR10X1Q8NGY0 326 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 TOMM40LQ969M1 308 aa9.11□□□□□ -0.95
YBX3-216ENST00000544622 URM1Q9BTM9 101 aaKnown RBP9.11□□□□□ -0.95
YBX3-216ENST00000544622 IGHV1-3A0A0C4DH29 117 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 TMEM272A0A1B0GTI8 110 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 PDCD5O14737 125 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 HSD17B6O14756 317 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 GAPDHP04406 335 aaKnown RBP9.1□□□□□ -0.95
YBX3-216ENST00000544622 SNRNP70P08621 437 aaKnown RBP9.1□□□□□ -0.95
YBX3-216ENST00000544622 RANBP1P43487 201 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 OR10A3P58181 314 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 PLAC9Q5JTB6 97 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 C22orf42Q6IC83 251 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 ODF3L1Q8IXM7 274 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 PRR18Q8N4B5 295 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 DRAM1Q8N682 238 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 KLHDC1Q8N7A1 406 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 OR56B4Q8NH76 319 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 RTN4IP1Q8WWV3 396 aaPredicted RBP9.1□□□□□ -0.95
YBX3-216ENST00000544622 AKR1E2Q96JD6 320 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 SLC25A33Q9BSK2 321 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 RIMS4Q9H426 269 aaPredicted RBP9.1□□□□□ -0.95
YBX3-216ENST00000544622 RAB9BQ9NP90 201 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 OR2S2Q9NQN1 319 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 PLEKHJ1Q9NW61 149 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 TXNL4BQ9NX01 149 aaKnown RBP9.1□□□□□ -0.95
YBX3-216ENST00000544622 JPT1Q9UK76 154 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 KCNK7Q9Y2U2 307 aa9.1□□□□□ -0.95
YBX3-216ENST00000544622 RAB27BO00194 218 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 YPEL1O60688 119 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 RAB3BP20337 219 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 PSMB9P28065 219 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 VEGFCP49767 419 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 HES5Q5TA89 166 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 Q6ZTK2 550 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 Q8N6K4 173 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 OR52L2PQ8NGH6 319 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 PTX4Q96A99 478 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 ARHGAP5-AS1Q96IT6 56 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 YPEL2Q96QA6 119 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 KCNIP1Q9NZI2 227 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 GNG12Q9UBI6 72 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 AK3Q9UIJ7 227 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 RAB22AQ9UL26 194 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 STUB1Q9UNE7 303 aa9.09□□□□□ -0.95
YBX3-216ENST00000544622 M0QZ24 198 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 M0QZK8 103 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 FGF16O43320 207 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 VSIG10L2P0DP72 767 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 MYL9P24844 172 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 CD1BP29016 333 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 REG1BP48304 166 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 GNMTQ14749 295 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 MOGAT2Q3SYC2 334 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 ABCA11PQ4W5N1 156 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 TPRA1Q86W33 373 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 IZUMO1Q8IYV9 350 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 C5orf56Q8N8D9 126 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 OR56B1Q8NGI3 324 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 OR10V1Q8NGI7 309 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 CAPSLQ8WWF8 208 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 GALMQ96C23 342 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 AGMATQ9BSE5 352 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 PECRQ9BY49 303 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 MMP27Q9H306 513 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 PLSCR3Q9NRY6 295 aa9.08□□□□□ -0.96
YBX3-216ENST00000544622 NOTCH1P46531 2555 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 NOTOA8MTQ0 251 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 ADARB2-AS1A8MUL3 147 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 ZNF736B4DX44 427 aaPredicted RBP9.07□□□□□ -0.96
YBX3-216ENST00000544622 TXNL1O43396 289 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 IGKV1D-33P01593 117 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 IGKV1-33P01594 117 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 LPLP06858 475 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 RAB6AP20340 208 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 PPP1CCP36873 323 aaKnown RBP9.07□□□□□ -0.96
YBX3-216ENST00000544622 TMEM95Q3KNT9 176 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 HIST2H2BDQ6DRA6 164 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 EAF1Q96JC9 268 aaPredicted RBP9.07□□□□□ -0.96
YBX3-216ENST00000544622 ZNF251Q9BRH9 671 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 HDHD3Q9BSH5 251 aaPredicted RBP9.07□□□□□ -0.96
YBX3-216ENST00000544622 OR51E2Q9H255 320 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 Q9N2K0 584 aa9.07□□□□□ -0.96
YBX3-216ENST00000544622 MOB4Q9Y3A3 225 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms