RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CRTAPO75718 401 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ASS1P00966 412 aaKnown RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 IGLV2-8P01709 118 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ORM1P02763 201 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ARG1P05089 322 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 CDK1P06493 297 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 RHOCP08134 193 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 RPSAP08865 295 aaKnown RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TFPTP0C1Z6 253 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 IGHV3-30-3P0DP02 117 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 USF1P22415 310 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 GGT2P36268 569 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 UBE2AP49459 152 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SERPINB9P50453 376 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 NUDT2P50583 147 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 CMC4P56277 68 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ESRRGP62508 458 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 BAMBIQ13145 260 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ERCC8Q13216 396 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SNRNP35Q16560 246 aaKnown RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 RNASE13Q5GAN3 156 aaKnown RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TCEAL5Q5H9L2 206 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ARL9Q6T311 187 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SPINT4Q6UDR6 99 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 GLT6D1Q7Z4J2 308 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 CALHM1Q8IU99 346 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ARHGAP18Q8N392 663 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF555Q8NEP9 628 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 OR2AE1Q8NHA4 323 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 APH1BQ8WW43 257 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 RASSF5Q8WWW0 418 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TCEAL3Q969E4 200 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF285Q96NJ3 590 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 IP6K3Q96PC2 410 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 HDHD3Q9BSH5 251 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 COA1Q9GZY4 146 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 EDA2RQ9HAV5 297 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 RRAGDQ9NQL2 400 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 MCUBQ9NWR8 336 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SDHAF2Q9NX18 166 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TAS2R9Q9NYW1 312 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 OPN4Q9UHM6 478 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 NDRG2Q9UN36 371 aaKnown RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 HES2Q9Y543 173 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 NCKAP5O14513 1909 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 MUC22E2RYF6 1773 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FANCAO15360 1455 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PLXNB1O43157 2135 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CLUHO75153 1309 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 MYH9P35579 1960 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 DYNC2H1Q8NCM8 4307 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 KMT2CQ8NEZ4 4911 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 C9orf170A2RU37 121 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FAM159BA6NKW6 160 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 K7EP13 123 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ACOX3O15254 700 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 DEDDO75618 318 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SERPINB7O75635 380 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 RPP14O95059 124 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 GIPP09681 153 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CTLA4P16410 223 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF823P16415 610 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 LGALS7P47929 136 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TAF6P49848 677 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 GDI2P50395 445 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR1Q1Q15612 314 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SMARCD3Q6STE5 483 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF767PQ75MW2 155 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PRNTQ86SH4 94 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CPNE9Q8IYJ1 553 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SYCE1Q8N0S2 351 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CLDN22Q8N7P3 220 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 Q8N976 141 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR52E2Q8NGJ4 325 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR2K2Q8NGT1 345 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR6K3Q8NGY3 331 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TEX47Q8TBZ9 253 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SDR42E1Q8WUS8 393 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SLC25A46Q96AG3 418 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 DDIT4LQ96D03 193 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FXYD5Q96DB9 178 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 STARD4Q96DR4 205 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 L3HYPDHQ96EM0 354 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 C20orf144Q9BQM9 153 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SLC25A2Q9BXI2 301 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ZSCAN16Q9H4T2 348 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 C16orf95Q9H693 158 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FAM60AQ9NP50 221 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PARP11Q9NR21 331 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TRAPPC1Q9Y5R8 145 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SOX21Q9Y651 276 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TRPM6Q9BX84 2022 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 MBD5Q9P267 1494 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FAT4Q6V0I7 4981 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 DIP2CQ9Y2E4 1556 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TNS3Q68CZ2 1445 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 RGPD8O14715 1765 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 RGPD5Q99666 1765 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SLIT1O75093 1534 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ATP7AQ04656 1500 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms