RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 METTL1Q9UBP6 276 aaKnown RBP13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 TRAPPC2LQ9UL33 140 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 hCG_1809904A0A1W2PP81 198 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 A0A1W2PR64 198 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 A0A1W2PRV1 198 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 IGKV1-39P01597 117 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 IGKV1D-39P04432 117 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 ACAA1P09110 424 aaPredicted RBP13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 CTAG1AP78358 180 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 ICAM4Q14773 271 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 ZNF146Q15072 292 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 KHDC3LQ587J8 217 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 C1QL4Q86Z23 238 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 CLDND2Q8NHS1 167 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 MBNL3Q9NUK0 354 aaKnown RBP13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 CACNG5Q9UF02 275 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 FRYQ5TBA9 3013 aa13.58□□□□□ -0.24
CHMP1A-202ENST00000535997 TRGV5A0A0B4J1U4 118 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 C3orf80F5H4A9 247 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 SLC25A24Q6NUK1 477 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 YPEL4Q96NS1 127 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 LIN7CQ9NUP9 197 aaKnown RBP13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 PPP1R3CQ9UQK1 317 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 RBM7Q9Y580 266 aaKnown RBP13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 GPR179Q6PRD1 2367 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 A0A087WWC5 75 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 H3BP45 60 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 SH2D1BO14796 132 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 P4HA3Q7Z4N8 544 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 WDR86Q86TI4 376 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 RNF150Q9ULK6 438 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 WIPI2Q9Y4P8 454 aa13.57□□□□□ -0.24
CHMP1A-202ENST00000535997 A0A1W2PR80 420 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 SIRPB1O00241 398 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 IGHV2-5P01817 119 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 PGA5P0DJD9 388 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 PPP1CBP62140 327 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 TGFBR3Q03167 851 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 ZNF585BQ52M93 769 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 HEPN1Q6WQI6 88 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 ZNF429Q86V71 674 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 PRR18Q8N4B5 295 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 OR10G4Q8NGN3 311 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 RAB39BQ96DA2 213 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 OR2J1Q9GZK6 312 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 TRAV39A0A0B4J263 110 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 IFNA17P01571 189 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 IGKV1-5P01602 117 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 RAC2P15153 192 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 TAGLN2P37802 199 aaKnown RBP13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 CEACAM6P40199 344 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 IZUMO4Q1ZYL8 232 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 CYB561D1Q8N8Q1 229 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 GMPPAQ96IJ6 420 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 LOXL4Q96JB6 756 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 PSENENQ9NZ42 101 aa13.56□□□□□ -0.24
CHMP1A-202ENST00000535997 A0A1W2PPE3 182 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 CDX4O14627 284 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 CDIPTO14735 213 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 SMPD2O60906 423 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 TNFSF15O95150 251 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 NXPH2O95156 264 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 S100A9P06702 114 aaKnown RBP13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 OR8U8P0C7N1 319 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 SMIM6P0DI80 62 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 UBE2KP61086 200 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 HBG1P69891 147 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 HBG2P69892 147 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 TMEM267Q0VDI3 215 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 FABP9Q0Z7S8 132 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 IGFBP7Q16270 282 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 MUCL1Q96DR8 90 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 PSMG3Q9BT73 122 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 SPRR3Q9UBC9 169 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 CXorf65A6NEN9 183 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 WDR1O75083 606 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 SP9P0CG40 484 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 OR2B8PP59922 312 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 SERF2P84101 59 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 PLA2G2CQ5R387 149 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 SLC35E3Q7Z769 313 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 TVP23CQ96ET8 276 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 TCEAL7Q9BRU2 100 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 ZDHHC11Q9H8X9 412 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 CDH20Q9HBT6 801 aa13.55□□□□□ -0.24
CHMP1A-202ENST00000535997 RNF212BA8MTL3 300 aa13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 CEBPGP53567 150 aa13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 UBE2NP61088 152 aaKnown RBP13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 DLK1P80370 383 aa13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 GABRA6Q16445 453 aa13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 ACSF3Q4G176 576 aaPredicted RBP13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 ZNF766Q5HY98 468 aa13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 RNFT1Q5M7Z0 435 aa13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 VASH2Q86V25 355 aa13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 DEFB123Q8N688 67 aa13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 SEBOXQ9HB31 216 aaPredicted RBP13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 TMEM9BQ9NQ34 198 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms