RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 GPER1Q99527 375 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 OR51J1Q9H342 316 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 GHITMQ9H3K2 345 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 LYSTQ99698 3801 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 A0A1W2PPE3 182 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 SAC3D1A6NKF1 404 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 CDRT1O95170 752 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 HTR3BO95264 441 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 CD37P11049 281 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 RAB9AP51151 201 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 RPS11P62280 158 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 DEFB136Q30KP8 78 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 MORN2Q502X0 79 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 YIF1BQ5BJH7 314 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 C6orf141Q5SZD1 244 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 DMKNQ6E0U4 476 aaPredicted RBP8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 XAF1Q6GPH4 301 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 CD200R1LQ6Q8B3 271 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 ODF3L1Q8IXM7 274 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 STX19Q8N4C7 294 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 CBR4Q8N4T8 237 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 DUX3Q96PT4 197 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 BABAM2Q9NXR7 383 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 ING3Q9NXR8 418 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 TAS2R4Q9NYW5 299 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 ZNF107Q9UII5 783 aaPredicted RBP8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 JPT1Q9UK76 154 aa8.7□□□□□ -1.02
CLSTN3-206ENST00000535668 TRBV5-7A0A0A0MS05 114 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 IGHV7-81A0A0B4J1V7 117 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 IGHV3-72A0A0B4J1Y9 119 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 TRAV39A0A0B4J263 110 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 LOC100130705A0A1B0GUX0 176 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 IRGMA1A4Y4 181 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 AIPO00170 330 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 ITGB1BP1O14713 200 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 SLC31A2O15432 143 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 YPEL1O60688 119 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 WBP4O75554 376 aaKnown RBP8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 BRI3O95415 125 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 ECI1P42126 302 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 REG1BP48304 166 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 PPP3R1P63098 170 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 C5orf64Q2M2E5 130 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 ZNF260Q3ZCT1 412 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 Q499Y3 187 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 SYT6Q5T7P8 510 aaPredicted RBP8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 DDI2Q5TDH0 399 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 ZNF660Q6AZW8 331 aaPredicted RBP8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 ZNF833PQ6ZTB9 187 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 OR1N2Q8NGR9 330 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 OR10K1Q8NGX5 313 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 PGLYRP3Q96LB9 341 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 YPEL2Q96QA6 119 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 OR14A2Q96R54 314 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 CITED4Q96RK1 184 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 PRR25Q96S07 402 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 RNF5Q99942 180 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 KLK15Q9H2R5 256 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 GHRLQ9UBU3 117 aa8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 NKX1-2Q9UD57 310 aaPredicted RBP8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 DIMT1Q9UNQ2 313 aaKnown RBP8.69□□□□□ -1.02
CLSTN3-206ENST00000535668 TNCP24821 2201 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 MAGEA13PA6NCF6 341 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 MCRIP1C9JLW8 97 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 HBZP02008 142 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 FUT3P21217 361 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 FAM27D1Q5T7N8 215 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 SIGIRRQ6IA17 410 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 ACSM6Q6P461 480 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 TMPRSS11AQ6ZMR5 421 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 SATL1Q86VE3 508 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 PQLC1Q8N2U9 271 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 PACRGLQ8N7B6 248 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 PYDC1Q8WXC3 89 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 Q96M66 194 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 S100A13Q99584 98 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 TM2D3Q9BRN9 247 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 UQCC2Q9BRT2 126 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 C9orf16Q9BUW7 83 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 TOLLIPQ9H0E2 274 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 AMBNQ9NP70 447 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 GNG12Q9UBI6 72 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 MRPS28Q9Y2Q9 187 aaKnown RBP8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 NUBP2Q9Y5Y2 271 aa8.68□□□□□ -1.02
CLSTN3-206ENST00000535668 NBR2O15453 112 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 RCC1P18754 421 aaPredicted RBP8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 SOX2P48431 317 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 ACTBP60709 375 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 LTC4SQ16873 150 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 SLC22A6Q4U2R8 563 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 AKIRIN2Q53H80 203 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 OGFRL1Q5TC84 451 aaPredicted RBP8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 RAB12Q6IQ22 244 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 PYHIN1Q6K0P9 492 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 TMEM65Q6PI78 240 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 SBSPONQ8IVN8 264 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 THRSPQ92748 146 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 GHSRQ92847 366 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 SLC29A1Q99808 456 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 NABP2Q9BQ15 211 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms