RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 IL6RP08887 468 aaPredicted RBP7.81□□□□□ -1.16
SF3B2-216ENST00000534765 DANCRP0C864 163 aa7.81□□□□□ -1.16
SF3B2-216ENST00000534765 HLA-GP17693 338 aa7.81□□□□□ -1.16
SF3B2-216ENST00000534765 KCNMB1Q16558 191 aa7.81□□□□□ -1.16
SF3B2-216ENST00000534765 TSPO2Q5TGU0 170 aa7.81□□□□□ -1.16
SF3B2-216ENST00000534765 CFAP161Q6P656 301 aa7.81□□□□□ -1.16
SF3B2-216ENST00000534765 ZDHHC22Q8N966 263 aa7.81□□□□□ -1.16
SF3B2-216ENST00000534765 MRGPRDQ8TDS7 321 aa7.81□□□□□ -1.16
SF3B2-216ENST00000534765 RAB18Q9NP72 206 aa7.81□□□□□ -1.16
SF3B2-216ENST00000534765 TRAV36DV7A0A075B6V5 113 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 IGLV1-36A0A0B4J1U3 117 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 TOX4O94842 621 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 SRP19P09132 144 aaKnown RBP7.8□□□□□ -1.16
SF3B2-216ENST00000534765 GP1BBP13224 206 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 B3GALT5-AS1P59052 145 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 SMAGPQ0VAQ4 97 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 GGTLC2Q14390 218 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 OCIAD2Q56VL3 154 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 LGI3Q8N145 548 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 ZNF439Q8NDP4 499 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 ST6GALNAC6Q969X2 333 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 SMIM12Q96EX1 92 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 SRXN1Q9BYN0 137 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 CST9LQ9H4G1 147 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 P4HTMQ9NXG6 502 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 ZNF708P17019 499 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 CDAP32320 146 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 SUCLG1P53597 346 aaKnown RBP7.8□□□□□ -1.16
SF3B2-216ENST00000534765 FAM3AP98173 230 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 SCGB2A2Q13296 93 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 SLC17A1Q14916 467 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 TRIP6Q15654 476 aaKnown RBP7.8□□□□□ -1.16
SF3B2-216ENST00000534765 PRSS8Q16651 343 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 ACOT6Q3I5F7 207 aaPredicted RBP7.8□□□□□ -1.16
SF3B2-216ENST00000534765 HIKESHIQ53FT3 197 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 C6orf15Q6UXA7 325 aaPredicted RBP7.8□□□□□ -1.16
SF3B2-216ENST00000534765 VASH2Q86V25 355 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 SCGB1C1Q8TD33 95 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 ZCCHC14Q8WYQ9 949 aaKnown RBP7.8□□□□□ -1.16
SF3B2-216ENST00000534765 CSTL1Q9H114 145 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 LPAR5Q9H1C0 372 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 C1orf198Q9H425 327 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 METTL7AQ9H8H3 244 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 PLA2G2EQ9NZK7 142 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 WASHC3Q9Y3C0 194 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 MED13LQ71F56 2210 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 NSG1A0A0A6YYJ2 146 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 LIPT2A6NK58 231 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 ZNF850A8MQ14 1090 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 CBR3O75828 277 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 TNFSF15O95150 251 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 PGCP20142 388 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 ATP6V0CP27449 155 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 MFGE8Q08431 387 aaPredicted RBP7.8□□□□□ -1.16
SF3B2-216ENST00000534765 C17orf67Q0P5P2 114 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 SAMD13Q5VXD3 122 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 KCNIP4Q6PIL6 250 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 ABHD12BQ7Z5M8 362 aaPredicted RBP7.8□□□□□ -1.16
SF3B2-216ENST00000534765 OR2T10Q8NGZ9 312 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 TNFRSF14Q92956 283 aa7.8□□□□□ -1.16
SF3B2-216ENST00000534765 MAP1LC3B2A6NCE7 125 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 A8MVM7 634 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 C22orf46C9J442 243 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 HSD17B6O14756 317 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 MT-CO2P00403 227 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 COL25A1Q9BXS0 654 aaPredicted RBP7.79□□□□□ -1.16
SF3B2-216ENST00000534765 MAP1LC3BQ9GZQ8 125 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 ZNF665Q9H7R5 613 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 IGLV3-32A0A0A0MS00 114 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 B4DEV8 164 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 TRAF3IP2O43734 574 aaPredicted RBP7.79□□□□□ -1.16
SF3B2-216ENST00000534765 OR7C2O60412 319 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 NEURL1O76050 574 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 RENP00797 406 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 IFNA5P01569 189 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 FOLR3P41439 243 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 AMTP48728 403 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 LINC00346Q8IVM7 164 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 TMEM156Q8N614 296 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 SEPSECSQ9HD40 501 aaKnown RBP7.79□□□□□ -1.16
SF3B2-216ENST00000534765 LYRM2Q9NU23 88 aaPredicted RBP7.79□□□□□ -1.16
SF3B2-216ENST00000534765 COA3Q9Y2R0 106 aaPredicted RBP7.79□□□□□ -1.16
SF3B2-216ENST00000534765 NSG2Q9Y328 171 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 ZNF816-ZNF321PA0A0X1KG74 233 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 TMEM212A6NML5 194 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 SSSCA1O60232 199 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 SLC16A7O60669 478 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 APOA2P02652 100 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 SGCBQ16585 318 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 TMEM176BQ3YBM2 270 aaPredicted RBP7.79□□□□□ -1.16
SF3B2-216ENST00000534765 WDR38Q5JTN6 314 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 YRDCQ86U90 279 aaKnown RBP7.79□□□□□ -1.16
SF3B2-216ENST00000534765 CDC20BQ86Y33 519 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 OR5AU1Q8NGC0 362 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 WFDC12Q8WWY7 111 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 GSX1Q9H4S2 264 aaPredicted RBP7.79□□□□□ -1.16
SF3B2-216ENST00000534765 B9D1Q9UPM9 204 aa7.79□□□□□ -1.16
SF3B2-216ENST00000534765 B3GALT5Q9Y2C3 310 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms