RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 LDLRAD4O15165 306 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 OGG1O15527 345 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 HTR3BO95264 441 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 IGHV3-43DP0DP04 118 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 RAB3AP20336 220 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 MYF6P23409 242 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 RAB9AP51151 201 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 MMDQ15546 238 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 NHLRC3Q5JS37 347 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 FAM53AQ6NSI3 398 aaPredicted RBP12.44□□□□□ -0.42
COL16A1-216ENST00000529928 RPL22L1Q6P5R6 122 aaKnown RBP12.44□□□□□ -0.42
COL16A1-216ENST00000529928 ASCL4Q6XD76 172 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 UBALD1Q8TB05 177 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 TSEN15Q8WW01 171 aaKnown RBP12.44□□□□□ -0.42
COL16A1-216ENST00000529928 DLX4Q92988 240 aaPredicted RBP12.44□□□□□ -0.42
COL16A1-216ENST00000529928 TMEM80Q96HE8 168 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 EDA2RQ9HAV5 297 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 RAB9BQ9NP90 201 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 BABAM2Q9NXR7 383 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 DHDHQ9UQ10 334 aa12.44□□□□□ -0.42
COL16A1-216ENST00000529928 EXOSC1Q9Y3B2 195 aaKnown RBP12.44□□□□□ -0.42
COL16A1-216ENST00000529928 DNAH7Q8WXX0 4024 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 FAM90A10PA6NDY2 464 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 ATP6V0E1O15342 81 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 SLC31A2O15432 143 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 OR8U9P0C7N5 309 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 VHLP40337 213 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 RBM11P57052 281 aaKnown RBP12.43□□□□□ -0.42
COL16A1-216ENST00000529928 TMEM30BQ3MIR4 351 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 DMKNQ6E0U4 476 aaPredicted RBP12.43□□□□□ -0.42
COL16A1-216ENST00000529928 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 ADAMTSL5Q6ZMM2 481 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 LINC00596Q86U02 117 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 ZNF439Q8NDP4 499 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 OR51A2Q8NGJ7 313 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 OR52N1Q8NH53 320 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 CCDC107Q8WV48 283 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 NRG4Q8WWG1 115 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 PLCXD1Q9NUJ7 323 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 FKBP14Q9NWM8 211 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 ZNF581Q9P0T4 197 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 MRPS28Q9Y2Q9 187 aaKnown RBP12.43□□□□□ -0.42
COL16A1-216ENST00000529928 BIRC6Q9NR09 4857 aa12.43□□□□□ -0.42
COL16A1-216ENST00000529928 TRAV41A0A0B4J266 112 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 LINC01619G3V211 115 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 HLA-DRB1P01911 266 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 CSTBP04080 98 aaKnown RBP12.42□□□□□ -0.42
COL16A1-216ENST00000529928 VEGFCP49767 419 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 RPS11P62280 158 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL16A1-216ENST00000529928 ST3GAL4Q11206 333 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 LSAMPQ13449 338 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 SRSF7Q16629 238 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL16A1-216ENST00000529928 TMPRSS11AQ6ZMR5 421 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 C8orf59Q8N0T1 100 aaPredicted RBP12.42□□□□□ -0.42
COL16A1-216ENST00000529928 GPR148Q8TDV2 347 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 NEK7Q8TDX7 302 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 SMIM19Q96E16 107 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 RBMXL1Q96E39 390 aaKnown RBP12.42□□□□□ -0.42
COL16A1-216ENST00000529928 PGLYRP3Q96LB9 341 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 IL36GQ9NZH8 169 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 CNOT2Q9NZN8 540 aaKnown RBP12.42□□□□□ -0.42
COL16A1-216ENST00000529928 GNG12Q9UBI6 72 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 PSORS1C1Q9UIG5 152 aa12.42□□□□□ -0.42
COL16A1-216ENST00000529928 SACSQ9NZJ4 4579 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 AIPO00170 330 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 GEMIN2O14893 280 aaKnown RBP12.41□□□□□ -0.42
COL16A1-216ENST00000529928 SPINT2O43291 252 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 LANCL1O43813 399 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 CDRT1O95170 752 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 MT-ND4P03905 459 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 IGHV4-30-4P0DP06 118 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 MYL12AP19105 171 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 SOX2P48431 317 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 SLURP1P55000 103 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 MPV17LQ2QL34 196 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 CT45A1Q5HYN5 189 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 ATAD3CQ5T2N8 411 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 STEAP3Q658P3 488 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 ZNF497Q6ZNH5 498 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 LYPD6Q86Y78 171 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 STX19Q8N4C7 294 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 MINDY2Q8NBR6 621 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 CT45A3Q8NHU0 189 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 ARPC1AQ92747 370 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 OR4C12Q96R67 309 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 TOLLIPQ9H0E2 274 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 ALX4Q9H161 411 aaPredicted RBP12.41□□□□□ -0.42
COL16A1-216ENST00000529928 METTL9Q9H1A3 318 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 TAS2R4Q9NYW5 299 aa12.41□□□□□ -0.42
COL16A1-216ENST00000529928 IGHV7-81A0A0B4J1V7 117 aa12.4□□□□□ -0.42
COL16A1-216ENST00000529928 TRBV5-5A0A0J9YX44 114 aa12.4□□□□□ -0.42
COL16A1-216ENST00000529928 MAGEA13PA6NCF6 341 aa12.4□□□□□ -0.42
COL16A1-216ENST00000529928 EFCAB10A6NFE3 127 aa12.4□□□□□ -0.42
COL16A1-216ENST00000529928 A8MZ25 164 aa12.4□□□□□ -0.42
COL16A1-216ENST00000529928 ZNF134P52741 427 aa12.4□□□□□ -0.42
COL16A1-216ENST00000529928 ACTBP60709 375 aa12.4□□□□□ -0.42
COL16A1-216ENST00000529928 PITPNAQ00169 270 aa12.4□□□□□ -0.42
COL16A1-216ENST00000529928 OR13C5Q8NGS8 318 aa12.4□□□□□ -0.42
COL16A1-216ENST00000529928 GHSRQ92847 366 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms