RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 SFXN4Q6P4A7 337 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 SLC25A48Q6ZT89 311 aaKnown RBP12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 PRR18Q8N4B5 295 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 CT45A3Q8NHU0 189 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 WFDC12Q8WWY7 111 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 ST6GALNAC6Q969X2 333 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 OCSTAMPQ9BR26 566 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 RIMS4Q9H426 269 aaPredicted RBP12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 RAB18Q9NP72 206 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 RAB9BQ9NP90 201 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 KCNIP1Q9NZI2 227 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 AMMECR1Q9Y4X0 333 aaPredicted RBP12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 A0A1W2PPI3 338 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 SMIM18P0DKX4 95 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 BRS3P32247 399 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 KIR2DS4P43632 304 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 HTD2P86397 168 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 GNMTQ14749 295 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 MORN2Q502X0 79 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 CCDC144NLQ6NUI1 221 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 OR52L2PQ8NGH6 319 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 OR10V1Q8NGI7 309 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 OR10R2Q8NGX6 335 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 OR10X1Q8NGY0 326 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 CFHR4Q92496 578 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 RPEQ96AT9 228 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 RANBP3Q9H6Z4 567 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 VCX3AQ9NNX9 186 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 OR2S2Q9NQN1 319 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 GNG12Q9UBI6 72 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 DAPK2Q9UIK4 370 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 PITPNC1Q9UKF7 332 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 RNF114Q9Y508 228 aa12.92□□□□□ -0.34
TSPAN4-218ENST00000529566 TIMM23O14925 209 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 TGFBR1P36897 503 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 MXD1Q05195 221 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 SRSF4Q08170 494 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 ZNF816Q0VGE8 651 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 HABP2Q14520 560 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 LY6G6FQ5SQ64 297 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 STEAP3Q658P3 488 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 SHISA2Q6UWI4 295 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 THNSL2Q86YJ6 484 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 Q8N2B8 174 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 TOMM40LQ969M1 308 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 GALMQ96C23 342 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 RAB3CQ96E17 227 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 ZNF702PQ9H963 129 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 Q9N2K0 584 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 C12orf4Q9NQ89 552 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 SIGLEC9Q9Y336 463 aa12.91□□□□□ -0.34
TSPAN4-218ENST00000529566 MFNGO00587 321 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 AIREO43918 545 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 YPEL1O60688 119 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 SNRPBP14678 240 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 PPP1CCP36873 323 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 MNDAP41218 407 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 RAB7AP51149 207 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 ZNF137PP52743 207 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 TIMM50Q3ZCQ8 353 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 MOB1BQ7L9L4 216 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 OR8H3Q8N146 312 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 DRAM1Q8N682 238 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 OR4C13Q8NGP0 309 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 YPEL2Q96QA6 119 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 NPFFR1Q9GZQ6 430 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 CHMP1AQ9HD42 196 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 JPT1Q9UK76 154 aa12.9□□□□□ -0.34
TSPAN4-218ENST00000529566 METTL21EPA6NDL7 271 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 HSD17B6O14756 317 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 AMY1AP04745 511 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 AMY2AP04746 511 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 HIST1H1DP16402 221 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 GNB3P16520 340 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 ARHGDIBP52566 201 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 BLCAPP62952 87 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 Q6ZS46 218 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 ODF3L1Q8IXM7 274 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 OR13F1Q8NGS4 319 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 OR56B4Q8NH76 319 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 LGALS14Q8TCE9 139 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 RBM14Q96PK6 669 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 CITED1Q99966 193 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 CMSS1Q9BQ75 279 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 ABRACLQ9P1F3 81 aa12.89□□□□□ -0.35
TSPAN4-218ENST00000529566 IGHV1-3A0A0C4DH29 117 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 HAX1O00165 279 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 OR2F2O95006 317 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 GAPDHP04406 335 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 SCTP09683 121 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 RPS19P39019 145 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 REG1BP48304 166 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 C16orf82Q7Z2V1 217 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 OR5H6Q8NGV6 325 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 SETD6Q8TBK2 473 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 RTN4IP1Q8WWV3 396 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 FUNDC2Q9BWH2 189 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 ATG5Q9H1Y0 275 aa12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 SERTAD4Q9NUC0 356 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms