RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 OR2B3O76000 313 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 OR2J3O76001 311 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 GADD45GO95257 159 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 MT-CO2P00403 227 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 BPGMP07738 259 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 HTR1AP08908 422 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 RD3LP0DJH9 198 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 LOXP28300 417 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 CASP1P29466 404 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 IFNGR2P38484 337 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 CD200P41217 278 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 AKR1C3P42330 323 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 RAB7AP51149 207 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 CLDN18P56856 261 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 UBE2NP61088 152 aaKnown RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 EMX1Q04741 257 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 ZBTB6Q15916 424 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 ACSM3Q53FZ2 586 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 PDZD11Q5EBL8 140 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 KPRPQ5T749 579 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 SYT6Q5T7P8 510 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 PRR9Q5T870 116 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 SAMD13Q5VXD3 122 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 SYPL2Q5VXT5 272 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 HAGHLQ6PII5 290 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 BOD1L2Q8IYS8 172 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 CMTM1Q8IZ96 169 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 GTPBP8Q8N3Z3 284 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 NPWQ8N729 165 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 OR5AK3PQ8NH89 298 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 LINC01560Q8TB33 94 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 DCAKDQ8WVC6 231 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 ASB17Q8WXJ9 295 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 ACOT12Q8WYK0 555 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 RORBQ92753 470 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 PTH2Q96A98 100 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 TLCD1Q96CP7 247 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 RNF170Q96K19 258 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 KLF6Q99612 283 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 TBL1XR1Q9BZK7 514 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 NKX6-2Q9C056 277 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 PARP12Q9H0J9 701 aaKnown RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 TLNRD1Q9H1K6 362 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 RNF122Q9H9V4 155 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 AGPAT4Q9NRZ5 378 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 C14orf105Q9NVL8 296 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 PLEKHJ1Q9NW61 149 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 RASL12Q9NYN1 266 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 SNX12Q9UMY4 172 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 SIGLEC9Q9Y336 463 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 RBM7Q9Y580 266 aaKnown RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 KPTNQ9Y664 436 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 V9GYS6 101 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 CC2D2AQ9P2K1 1620 aa2.34□□□□□ -2.04
CTR9-204ENST00000529355 CITO14578 2027 aa2.34□□□□□ -2.04
CTR9-204ENST00000529355 KNDC1Q76NI1 1749 aa2.34□□□□□ -2.04
CTR9-204ENST00000529355 ABCC5O15440 1437 aa2.34□□□□□ -2.04
CTR9-204ENST00000529355 CD109Q6YHK3 1445 aa2.34□□□□□ -2.04
CTR9-204ENST00000529355 MYOM2P54296 1465 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ABCC10Q5T3U5 1492 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CUX1P39880 1505 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 NCKAP5O14513 1909 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ABCA8O94911 1581 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CEP170BQ9Y4F5 1589 aaPredicted RBP2.33□□□□□ -2.04
CTR9-204ENST00000529355 IGLV3-12A0A075B6K2 115 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ARL5CA6NH57 179 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ZNF850A8MQ14 1090 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 PPP5D1E7EU14 171 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 H0Y980 276 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 TEX46H3BTG2 121 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CLDN34H7C241 214 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 AIPO00170 330 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 FAAHO00519 579 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 RFXANKO14593 260 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 BPY2O14599 106 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 TGOLN2O43493 480 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 XRCC2O43543 280 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 SSNA1O43805 119 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 OR2F2O95006 317 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ETHE1O95571 254 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 TTC4O95801 387 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 HLA-DQA1P01909 254 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 MYL2P10916 166 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 FGF7P21781 194 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CD82P27701 267 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 PSMB5P28074 263 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 RBM34P42696 430 aaKnown RBP2.33□□□□□ -2.04
CTR9-204ENST00000529355 MAP2K4P45985 399 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CXCL12P48061 93 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CRYBA4P53673 196 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CRISP1P54107 249 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CDKN2DP55273 166 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 OR2B8PP59922 312 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 EIF5AP63241 154 aaKnown RBP2.33□□□□□ -2.04
CTR9-204ENST00000529355 CEACAM21Q3KPI0 293 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ACSBG2Q5FVE4 666 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 HIST2H3PS2Q5TEC6 136 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 SDHAF4Q5VUM1 108 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 GLYATQ6IB77 296 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 EIF5AL1Q6IS14 154 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms