RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 CD1BP29016 333 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 GABARAPL2P60520 117 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 HES1Q14469 280 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 IZUMO1Q8IYV9 350 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 FAM89BQ8N5H3 189 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 ZNF439Q8NDP4 499 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 OR4F17Q8NGA8 305 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 OR5AU1Q8NGC0 362 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 GALMQ96C23 342 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 R3HDM4Q96D70 268 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 OR4F4Q96R69 305 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 CITED2Q99967 270 aaPredicted RBP13.74□□□□□ -0.21
CCNC-213ENST00000523541 OR2S2Q9NQN1 319 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 JPT1Q9UK76 154 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 A0A1W2PRX2 142 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 DENRO43583 198 aaKnown RBP13.73□□□□□ -0.21
CCNC-213ENST00000523541 RPS25P62851 125 aaKnown RBP13.73□□□□□ -0.21
CCNC-213ENST00000523541 CD83Q01151 205 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 MORN2Q502X0 79 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 MOB3BQ86TA1 216 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 SVOPQ8N4V2 548 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 OR8H1Q8NGG4 311 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 OR2T10Q8NGZ9 312 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 MRPL30Q8TCC3 161 aaKnown RBP13.73□□□□□ -0.21
CCNC-213ENST00000523541 RTN4IP1Q8WWV3 396 aaPredicted RBP13.73□□□□□ -0.21
CCNC-213ENST00000523541 PLGRKTQ9HBL7 147 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 PLEKHJ1Q9NW61 149 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 HSF4Q9ULV5 492 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 MGAT4AQ9UM21 535 aa13.73□□□□□ -0.21
CCNC-213ENST00000523541 NOTCH1P46531 2555 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 TRAV1-2A0A0B4J238 106 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 A0A1W2PPE3 182 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 YPEL1O60688 119 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
CCNC-213ENST00000523541 BLVRBP30043 206 aaPredicted RBP13.72□□□□□ -0.21
CCNC-213ENST00000523541 MAP2K4P45985 399 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 FABP5Q01469 135 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 UNC119Q13432 240 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 DIAPH2-AS1Q14236 149 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 CT45A1Q5HYN5 189 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 KHDC1LQ5JSQ8 128 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 NKAPLQ5M9Q1 402 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 OR10K2Q6IF99 312 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 CD200R1LQ6Q8B3 271 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 CT45A3Q8NHU0 189 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 YPEL2Q96QA6 119 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 SULT4A1Q9BR01 284 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 FAAP24Q9BTP7 215 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 GHITMQ9H3K2 345 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 ABRACLQ9P1F3 81 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 V9GY05 133 aa13.72□□□□□ -0.21
CCNC-213ENST00000523541 TRBV6-6A0A0A6YYG2 114 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 IGHV3-43A0A0B4J1X8 118 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 SH2D7A6NKC9 451 aaPredicted RBP13.71□□□□□ -0.21
CCNC-213ENST00000523541 PDCD5O14737 125 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 LANCL1O43813 399 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 NAPSAO96009 420 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 IGKV1D-33P01593 117 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 IGKV1-33P01594 117 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 IGHV3-43DP0DP04 118 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 ZNF134P52741 427 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 RAB11BQ15907 218 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 ZNF880Q6PDB4 577 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 MOB1BQ7L9L4 216 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 TGIF2LXQ8IUE1 241 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 PRR18Q8N4B5 295 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 C5orf56Q8N8D9 126 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 OR4X2Q8NGF9 303 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 OR1L1Q8NH94 360 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 UBALD1Q8TB05 177 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 EAF1Q96JC9 268 aaPredicted RBP13.71□□□□□ -0.21
CCNC-213ENST00000523541 LPAR5Q9H1C0 372 aa13.71□□□□□ -0.21
CCNC-213ENST00000523541 AK6Q9Y3D8 172 aaKnown RBP13.71□□□□□ -0.21
CCNC-213ENST00000523541 TRDV1A0A1B0GX56 115 aa13.7□□□□□ -0.22
CCNC-213ENST00000523541 G3V4G9 280 aa13.7□□□□□ -0.22
CCNC-213ENST00000523541 MOSP00540 346 aa13.7□□□□□ -0.22
CCNC-213ENST00000523541 HMGN3Q15651 99 aa13.7□□□□□ -0.22
CCNC-213ENST00000523541 C6orf201Q7Z4U5 140 aa13.7□□□□□ -0.22
CCNC-213ENST00000523541 Q8N6K4 173 aa13.7□□□□□ -0.22
CCNC-213ENST00000523541 CHPT1Q8WUD6 406 aa13.7□□□□□ -0.22
CCNC-213ENST00000523541 GFI1Q99684 422 aa13.7□□□□□ -0.22
CCNC-213ENST00000523541 NDUFB11Q9NX14 153 aa13.7□□□□□ -0.22
CCNC-213ENST00000523541 TSSC4Q9Y5U2 329 aaPredicted RBP13.7□□□□□ -0.22
CCNC-213ENST00000523541 TCRBV4S1A1TA0A5B7 111 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 IGHG2P01859 326 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 PF4V1P10720 104 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 HNF4GQ14541 408 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 C2orf76Q3KRA6 126 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 FBLN7Q53RD9 439 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 UBE2UQ5VVX9 321 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 COMMD1Q8N668 190 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 OR56B1Q8NGI3 324 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 FCGR1BQ92637 280 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 FAM3DQ96BQ1 224 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 LIN7CQ9NUP9 197 aaKnown RBP13.69□□□□□ -0.22
CCNC-213ENST00000523541 STEAP1Q9UHE8 339 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 RAB22AQ9UL26 194 aa13.69□□□□□ -0.22
CCNC-213ENST00000523541 ADARB2-AS1A8MUL3 147 aa13.68□□□□□ -0.22
CCNC-213ENST00000523541 ITGB1BP1O14713 200 aa13.68□□□□□ -0.22
CCNC-213ENST00000523541 REG1BP48304 166 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms