RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 AMMECR1Q9Y4X0 333 aaPredicted RBP6.38□□□□□ -1.39
SCARNA20.3-201ENST00000516913 KIAA1109Q2LD37 5005 aa6.38□□□□□ -1.39
SCARNA20.3-201ENST00000516913 IGHV4OR15-8A0A075B7B6 117 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 A0A087WW49 117 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 TRBV5-7A0A0A0MS05 114 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 TMEM30CPA0ZSE6 113 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 TMEM212A6NML5 194 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 C3orf84H3BNL1 204 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 ORC5O43913 435 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RAMP3O60896 148 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 BAG2O95816 211 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 FRMD6-AS1P0C7T7 363 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RAB3AP20336 220 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 GZMHP20718 246 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 SERPINA2P20848 420 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 CHATP28329 748 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 BLVRBP30043 206 aaPredicted RBP6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 SLC6A1P30531 599 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 PPP1CCP36873 323 aaKnown RBP6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RUNX1Q01196 453 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RSU1Q15404 277 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 SLC22A6Q4U2R8 563 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 CXorf66Q5JRM2 361 aaPredicted RBP6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 C6orf141Q5SZD1 244 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 C9orf66Q5T8R8 295 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 MEDAGQ5VYS4 303 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 IL34Q6ZMJ4 242 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 FOXRED2Q8IWF2 684 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 COMMD1Q8N668 190 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 OR5M8Q8NGP6 311 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 OR8U1Q8NH10 309 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 MUC7Q8TAX7 377 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 MRPL30Q8TCC3 161 aaKnown RBP6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 TSEN15Q8WW01 171 aaKnown RBP6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 TMEM106AQ96A25 262 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RCHY1Q96PM5 261 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 NABP2Q9BQ15 211 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 FAM192AQ9GZU8 254 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 BANF2Q9H503 90 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 EDA2RQ9HAV5 297 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 FGF20Q9NP95 211 aaPredicted RBP6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 PCDHB16Q9NRJ7 776 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 IMPAD1Q9NX62 359 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 ADAM30Q9UKF2 790 aa6.37□□□□□ -1.39
SCARNA20.3-201ENST00000516913 A0A0A6YYD4 124 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 CASQ2O14958 399 aaPredicted RBP6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 MPZL2O60487 215 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 GPX5O75715 221 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 SC5DO75845 299 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RPSAP08865 295 aaKnown RBP6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 SOX6P35712 828 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 ZNF93P35789 620 aaPredicted RBP6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 KCNJ3P48549 501 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RAB9AP51151 201 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 ACTBP60709 375 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 SLC35B1P78383 322 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 LRRC36Q1X8D7 754 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 MORN2Q502X0 79 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 KLHL22Q53GT1 634 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 ATAD3CQ5T2N8 411 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 OGFRL1Q5TC84 451 aaPredicted RBP6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 DDI2Q5TDH0 399 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 DMKNQ6E0U4 476 aaPredicted RBP6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 ZFAND6Q6FIF0 208 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 OR10K2Q6IF99 312 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 UNQ9370/PRO34162Q6UXP9 181 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 PQLC1Q8N2U9 271 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 DPF1Q92782 380 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 GHSRQ92847 366 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 MUL1Q969V5 352 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 UBE2E2Q96LR5 201 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 GPER1Q99527 375 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 ZNF184Q99676 751 aaPredicted RBP6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 TOLLIPQ9H0E2 274 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 IFI27L2Q9H2X8 130 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 OR51J1Q9H342 316 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 MBNL3Q9NUK0 354 aaKnown RBP6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 FAM118AQ9NWS6 357 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 ZNF580Q9UK33 172 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 GMPPBQ9Y5P6 360 aa6.36□□□□□ -1.39
SCARNA20.3-201ENST00000516913 LCE6AA0A183 80 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 LOC100130705A0A1B0GUX0 176 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 UBE2QL1A1L167 161 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 H3BUI4 141 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 LANCL1O43813 399 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 HLA-DRB1P01911 266 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 OCM2P0CE71 109 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 OCMP0CE72 109 aaPredicted RBP6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 CT45A6P0DMU7 189 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 CT45A5P0DMU8 189 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 CT45A7P0DMV0 189 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 FCGR1AP12314 374 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 BDKRB2P30411 391 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 ARHGDIBP52566 201 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RAB40BQ12829 278 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 C5orf64Q2M2E5 130 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 MRGPRG-AS1Q2M3A8 158 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RPL39P5Q59GN2 51 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RAB12Q6IQ22 244 aa6.35□□□□□ -1.39
SCARNA20.3-201ENST00000516913 RPL22L1Q6P5R6 122 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms