RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SIX6O95475 246 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 PTBP3O95758 552 aaKnown RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CST4P01036 141 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 IGLV3-1P01715 115 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 LCATP04180 440 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ISG15P05161 165 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 GYPBP06028 91 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CD1AP06126 327 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ACAA1P09110 424 aaPredicted RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 UCHL1P09936 223 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CLUP10909 449 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 RPA2P15927 270 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ANXA7P20073 488 aaKnown RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CCNOP22674 350 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 TNFSF4P23510 183 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 MAPK3P27361 379 aaPredicted RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 HSD11B1P28845 292 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 S100A11P31949 105 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ATP6V1E1P36543 226 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CFHR2P36980 270 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 MYCNOSP40205 109 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 MEOX2P50222 304 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 RAB13P51153 203 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 RIDAP52758 137 aaKnown RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 H2BFSP57053 126 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 LINC01547P58512 204 aaPredicted RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 PSMA6P60900 246 aaKnown RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 RAB14P61106 215 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 FGF12P61328 243 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 PPP1CBP62140 327 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 POLR2GP62487 172 aaKnown RBP eCLIP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 SLC3A1Q07837 685 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 PSG7Q13046 419 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 EIF2B1Q14232 305 aaKnown RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 GK2Q14410 553 aaPredicted RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 TAF13Q15543 124 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 OR8B8Q15620 311 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 TRAM1Q15629 374 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 MPPED2Q15777 294 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 MEP1BQ16820 701 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 NKPD1Q17RQ9 610 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ZNF260Q3ZCT1 412 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 IGSF11Q5DX21 431 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 FAM76BQ5HYJ3 339 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 UBE2NLQ5JXB2 153 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 FAM74A1Q5RGS3 127 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 LY6G6FQ5SQ64 297 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 METTL11BQ5VVY1 283 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CORO6Q6QEF8 472 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ALKAL2Q6UX46 152 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 PGAP1Q75T13 922 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 SSX6Q7RTT6 188 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 TCF24Q7RTU0 167 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 MYPOPQ86VE0 399 aaPredicted RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 TPRA1Q86W33 373 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 SLC35F2Q8IXU6 374 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 IZUMO1Q8IYV9 350 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 PAQR4Q8N4S7 273 aaPredicted RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 POM121L12Q8N7R1 296 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 BEND2Q8NDZ0 799 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CSNK2A3Q8NEV1 391 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 BPIFCQ8NFQ6 507 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 OR8G5Q8NG78 346 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 OR5T2Q8NGG2 359 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 OR51L1Q8NGJ5 315 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 OR52B4Q8NGK2 314 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 OR1J1Q8NGS3 322 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 OR6N2Q8NGY6 317 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 OR52I2Q8NH67 350 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 COQ8AQ8NI60 647 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ABHD4Q8TB40 342 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 SLC25A40Q8TBP6 338 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 SNX33Q8WV41 574 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 RAB40AQ8WXH6 277 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 SGK3Q96BR1 496 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CMBLQ96DG6 245 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CMTM3Q96MX0 182 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 TECTBQ96PL2 329 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 P2RX4Q99571 388 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 C12orf57Q99622 126 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ALG8Q9BVK2 526 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 MRPL37Q9BZE1 423 aaKnown RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 NKX6-2Q9C056 277 aaPredicted RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 OR2J1Q9GZK6 312 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 SAV1Q9H4B6 383 aaPredicted RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 MED20Q9H944 212 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ADGRL4Q9HBW9 690 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 TRIM36Q9NQ86 728 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CENPMQ9NSP4 180 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 TMEM100Q9NV29 134 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 FAM206AQ9NX38 181 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 BABAM2Q9NXR7 383 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 ABRACLQ9P1F3 81 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 TAAR3PQ9P1P4 343 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 IL19Q9UHD0 177 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 DUSP13Q9UII6 198 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 SPATA2Q9UM82 520 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 CARHSP1Q9Y2V2 147 aaKnown RBP2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 MPC1Q9Y5U8 109 aa2.45□□□□□ -2.02
SCARNA13-201ENST00000516672 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms