RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 KCNK15Q9H427 330 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 SERTAD4Q9NUC0 356 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 MGAT4AQ9UM21 535 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 STUB1Q9UNE7 303 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 NBEAL1Q6ZS30 2694 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 PKD1L1Q8TDX9 2849 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 A0A0A6YYD4 124 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 IFITM5A6NNB3 132 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 FOXI3A8MTJ6 420 aaPredicted RBP10.22□□□□□ -0.77
CLCN3-210ENST00000515420 RGS11O94810 467 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 LPLP06858 475 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 EBI3Q14213 229 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 C2orf76Q3KRA6 126 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 C22orf42Q6IC83 251 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 TREML4Q6UXN2 200 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 Q6ZTK2 550 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 TPRA1Q86W33 373 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 KLHDC1Q8N7A1 406 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 OR1L1Q8NH94 360 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 ST6GALNAC6Q969X2 333 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 PTX4Q96A99 478 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 GALMQ96C23 342 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 OR2S2Q9NQN1 319 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 RAB22AQ9UL26 194 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 SIGLEC9Q9Y336 463 aa10.22□□□□□ -0.77
CLCN3-210ENST00000515420 TRRAPQ9Y4A5 3859 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 WNK1Q9H4A3 2382 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 IGHV3-43A0A0B4J1X8 118 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 IGHV1-3A0A0C4DH29 117 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 TMEM272A0A1B0GTI8 110 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 SHISA3A0PJX4 238 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 YPEL1O60688 119 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 IGHV3-43DP0DP04 118 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 RAB6AP20340 208 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 CD24P25063 80 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 CLDN12P56749 244 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 MORN2Q502X0 79 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 IZUMO1Q8IYV9 350 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 PRR18Q8N4B5 295 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 DRAM1Q8N682 238 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 OR56B4Q8NH76 319 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 UBALD1Q8TB05 177 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 WIPF2Q8TF74 440 aaPredicted RBP10.21□□□□□ -0.77
CLCN3-210ENST00000515420 YPEL2Q96QA6 119 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 WNT10AQ9GZT5 417 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 TXNL4BQ9NX01 149 aaKnown RBP10.21□□□□□ -0.77
CLCN3-210ENST00000515420 ABRACLQ9P1F3 81 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 SSR3Q9UNL2 185 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 MOB4Q9Y3A3 225 aa10.21□□□□□ -0.77
CLCN3-210ENST00000515420 A0A1W2PPE3 182 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 SOCS1O15524 211 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 FGF16O43320 207 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 SNRNP70P08621 437 aaKnown RBP10.2□□□□□ -0.78
CLCN3-210ENST00000515420 CD1BP29016 333 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 VDAC2P45880 294 aaPredicted RBP10.2□□□□□ -0.78
CLCN3-210ENST00000515420 VEGFCP49767 419 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 TMEM50BP56557 158 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 OR10A3P58181 314 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 BLCAPP62952 87 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 DIAPH2-AS1Q14236 149 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 C2orf68Q2NKX9 166 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 ARSJQ5FYB0 599 aaPredicted RBP10.2□□□□□ -0.78
CLCN3-210ENST00000515420 CT45A1Q5HYN5 189 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 HES5Q5TA89 166 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 CT45A3Q8NHU0 189 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 RTN4IP1Q8WWV3 396 aaPredicted RBP10.2□□□□□ -0.78
CLCN3-210ENST00000515420 PECRQ9BY49 303 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 MMP27Q9H306 513 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 CHMP1AQ9HD42 196 aaPredicted RBP10.2□□□□□ -0.78
CLCN3-210ENST00000515420 C12orf4Q9NQ89 552 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
CLCN3-210ENST00000515420 NOTOA8MTQ0 251 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 SLC31A2O15432 143 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 LANCL1O43813 399 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 PEX14O75381 377 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 TNFAIP8O95379 198 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 AMY1AP04745 511 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 AMY2AP04746 511 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 VSIG10L2P0DP72 767 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 TMEM11P17152 192 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 GADD45AP24522 165 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 ZNF134P52741 427 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 NR2C2APQ86WQ0 139 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 TGIF2LXQ8IUE1 241 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 OR10V1Q8NGI7 309 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 ARHGAP5-AS1Q96IT6 56 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 CYYR1Q96J86 154 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 ABHD14AQ9BUJ0 271 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 AK3Q9UIJ7 227 aa10.19□□□□□ -0.78
CLCN3-210ENST00000515420 METTL21EPA6NDL7 271 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 ITGB1BP1O14713 200 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 FBXO24O75426 580 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 IGKV1D-33P01593 117 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 IGKV1-33P01594 117 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 PPP1CCP36873 323 aaKnown RBP10.18□□□□□ -0.78
CLCN3-210ENST00000515420 HLA-DRB3P79483 266 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 HES1Q14469 280 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 ARL6IP1Q15041 203 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 ABCA11PQ4W5N1 156 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 FBLN7Q53RD9 439 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms