RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RBM48Q5RL73 367 aaKnown RBP8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 STEAP3Q658P3 488 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 GLT8D1Q68CQ7 371 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 ETV3LQ6ZN32 361 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 SLC35E3Q7Z769 313 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 ZNF329Q86UD4 541 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 STPG2Q8N412 459 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 PRR18Q8N4B5 295 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 Q8N9W7 124 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 OR2T10Q8NGZ9 312 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 CT45A3Q8NHU0 189 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 TAF9BQ9HBM6 251 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 LIN7CQ9NUP9 197 aaKnown RBP8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 AURKAIP1Q9NWT8 199 aaPredicted RBP8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 SCN3BQ9NY72 215 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 SLC22A1O15245 554 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 PLXNB1O43157 2135 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 LANCL1O43813 399 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 MOSP00540 346 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 MYF6P23409 242 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 GPR12P47775 334 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 RPL23AP62750 156 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 UNC119Q13432 240 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 GNMTQ14749 295 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 MED22Q15528 200 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 HSD17B12Q53GQ0 312 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 LIPKQ5VXJ0 399 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 FOXB2Q5VYV0 432 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 OR10K2Q6IF99 312 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 CEACAM19Q7Z692 300 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 FOXRED2Q8IWF2 684 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 FAM71E2Q8N5Q1 922 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 COMMD1Q8N668 190 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 LINC00482Q8N8I6 264 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 UFD1Q92890 307 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 RCC1LQ96I51 464 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 SULT4A1Q9BR01 284 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 TM2D1Q9BX74 207 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 TMEM59Q9BXS4 323 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 ANKRD60Q9BZ19 345 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 ABCG5Q9H222 651 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 KCNK15Q9H427 330 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 DUSP21Q9H596 190 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 PLSCR3Q9NRY6 295 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 JPT1Q9UK76 154 aa8.25□□□□□ -1.09
HMGXB3-205ENST00000514469 KIAA2026Q5HYC2 2103 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 LINC01548A6NM66 108 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 NCBP2LA6PVI3 153 aaKnown RBP8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 TMEM14DPA8MWL7 114 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 ZNF736B4DX44 427 aaPredicted RBP8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 AP4M1O00189 453 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 SRMP19623 302 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 HTR2CP28335 458 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 SLC6A1P30531 599 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 SLC35B1P78383 322 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 QRFPP83859 136 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 HTD2P86397 168 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 LSAMPQ13449 338 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 TPBGQ13641 420 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 HMGN3Q15651 99 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 MORN2Q502X0 79 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 NKAPLQ5M9Q1 402 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 LY6G6FQ5SQ64 297 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 OR2W3Q7Z3T1 314 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 ODF3L1Q8IXM7 274 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 OR8H1Q8NGG4 311 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 OR52L2PQ8NGH6 319 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 OR6M1Q8NGM8 313 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 KCNG3Q8TAE7 436 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 NEDD4LQ96PU5 975 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 S1PR3Q99500 378 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 GFI1Q99684 422 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 NICN1Q9BSH3 213 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 ABHD14AQ9BUJ0 271 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 ISYNA1Q9NPH2 558 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 OR2S2Q9NQN1 319 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 KCNIP1Q9NZI2 227 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 LINC00527Q9UJ94 153 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 TPRKBQ9Y3C4 175 aa8.24□□□□□ -1.09
HMGXB3-205ENST00000514469 A0A0A6YYD4 124 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 RGS10O43665 173 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 YPEL1O60688 119 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 DUS4LO95620 317 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 BPNT1O95861 308 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 NAPSAO96009 420 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 CRHBPP24387 322 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 PPP1CCP36873 323 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 F2RL1P55085 397 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 RPS25P62851 125 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 CFHR3Q02985 330 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 MLLT11Q13015 90 aaPredicted RBP8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 ZNF880Q6PDB4 577 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 TMEM91Q6ZNR0 172 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 C18orf65Q6ZTR6 163 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 C6orf201Q7Z4U5 140 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 C5orf24Q7Z6I8 188 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 MRPL41Q8IXM3 137 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 SVOPQ8N4V2 548 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 OR51D1Q8NGF3 324 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 MRAPQ8TCY5 172 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms