RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 BLVRBP30043 206 aaPredicted RBP7.75□□□□□ -1.17
RNF4-221ENST00000513643 BRS3P32247 399 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 RANBP1P43487 201 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 RAB7AP51149 207 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 CLDN12P56749 244 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 MORN2Q502X0 79 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 C22orf42Q6IC83 251 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 OR8H3Q8N146 312 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 Q8N6K4 173 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 OR4C13Q8NGP0 309 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 UBALD1Q8TB05 177 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 NEK7Q8TDX7 302 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 NEDD4LQ96PU5 975 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 YPEL2Q96QA6 119 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 URM1Q9BTM9 101 aaKnown RBP7.75□□□□□ -1.17
RNF4-221ENST00000513643 RIMS4Q9H426 269 aaPredicted RBP7.75□□□□□ -1.17
RNF4-221ENST00000513643 PLGRKTQ9HBL7 147 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 RAB9BQ9NP90 201 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 RAB22AQ9UL26 194 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 STUB1Q9UNE7 303 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 AMMECR1Q9Y4X0 333 aaPredicted RBP7.75□□□□□ -1.17
RNF4-221ENST00000513643 NOTCH3Q9UM47 2321 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 A0A1W2PPE3 182 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 PDCD5O14737 125 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 TIMM23O14925 209 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 RAB3BP20337 219 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 RAB6AP20340 208 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 PSMB9P28065 219 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 LTC4SQ16873 150 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 NKAPLQ5M9Q1 402 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 TPRA1Q86W33 373 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 ODF3L1Q8IXM7 274 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 DRAM1Q8N682 238 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 RPEQ96AT9 228 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 AGMATQ9BSE5 352 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 PRSS22Q9GZN4 317 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 TOLLIPQ9H0E2 274 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 PLSCR3Q9NRY6 295 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 PLEKHJ1Q9NW61 149 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 AK3Q9UIJ7 227 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 JPT1Q9UK76 154 aa7.74□□□□□ -1.17
RNF4-221ENST00000513643 PRKDCP78527 4128 aaKnown RBP7.74□□□□□ -1.17
RNF4-221ENST00000513643 IGHV3-43A0A0B4J1X8 118 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 IGHV1-3A0A0C4DH29 117 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 NOTOA8MTQ0 251 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 ITGB1BP1O14713 200 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 HSD17B6O14756 317 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 GAPDHP04406 335 aaKnown RBP7.73□□□□□ -1.17
RNF4-221ENST00000513643 FAM106CPP0CH98 169 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 IGHV3-43DP0DP04 118 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 MNDAP41218 407 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 GNG10P50151 68 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 ARHGDIBP52566 201 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 GNMTQ14749 295 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 HERPUD1Q15011 391 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 MOGAT2Q3SYC2 334 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 HES5Q5TA89 166 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 Q6ZTK2 550 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 IZUMO1Q8IYV9 350 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 OR52L2PQ8NGH6 319 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 OR56B1Q8NGI3 324 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 OR2T6Q8NHC8 308 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 RTN4IP1Q8WWV3 396 aaPredicted RBP7.73□□□□□ -1.17
RNF4-221ENST00000513643 TOMM40LQ969M1 308 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 ARHGAP5-AS1Q96IT6 56 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 ZNF251Q9BRH9 671 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 PECRQ9BY49 303 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 OR51E2Q9H255 320 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 Q9N2K0 584 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 OR2S2Q9NQN1 319 aa7.73□□□□□ -1.17
RNF4-221ENST00000513643 A0A0B4J203 849 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 IGKV1-6A0A0C4DH72 117 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 M0QZK8 103 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 MFNGO00587 321 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 LANCL1O43813 399 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 SNRNP70P08621 437 aaKnown RBP7.72□□□□□ -1.17
RNF4-221ENST00000513643 MYL9P24844 172 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 CD1BP29016 333 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 VEGFCP49767 419 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 MOB1BQ7L9L4 216 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 KLHDC1Q8N7A1 406 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 OR10X1Q8NGY0 326 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 OR56B4Q8NH76 319 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 GALMQ96C23 342 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 YIPF6Q96EC8 236 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 HDHD3Q9BSH5 251 aaPredicted RBP7.72□□□□□ -1.17
RNF4-221ENST00000513643 SLC25A33Q9BSK2 321 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.72□□□□□ -1.17
RNF4-221ENST00000513643 KCNIP1Q9NZI2 227 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 GNG12Q9UBI6 72 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 SSR3Q9UNL2 185 aa7.72□□□□□ -1.17
RNF4-221ENST00000513643 A0A087WXM4 84 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 ADARB2-AS1A8MUL3 147 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 FGF16O43320 207 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 TXNL1O43396 289 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 PROP1O75360 226 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 SLC2A2P11168 524 aaPredicted RBP7.71□□□□□ -1.18
RNF4-221ENST00000513643 CD36P16671 472 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 GADD45AP24522 165 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 SDC2P34741 201 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms