RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 VPREB3Q9UKI3 123 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 TRAPPC2LQ9UL33 140 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 FAM96BQ9Y3D0 163 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
SNCA-211ENST00000508895 TNCP24821 2201 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 IGHV3-43A0A0B4J1X8 118 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 SERPINE3A8MV23 424 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 F2RL2O00254 374 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 NOL3O60936 208 aaKnown RBP6.97□□□□□ -1.29
SNCA-211ENST00000508895 SCGNO76038 276 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 IGLV1-47P01700 117 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 IGHV3-7P01780 117 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 HBZP02008 142 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 ARG1P05089 322 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 FCGR3AP08637 254 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 IGHV3-43DP0DP04 118 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 CD24P25063 80 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 NFYBP25208 207 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 RORCP51449 518 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 HLA-DRB3P79483 266 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 DYNC1I2Q13409 638 aaKnown RBP6.97□□□□□ -1.29
SNCA-211ENST00000508895 DIAPH2-AS1Q14236 149 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 GNMTQ14749 295 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 ZNF260Q3ZCT1 412 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 MIDNQ504T8 468 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 TRAT1Q6PIZ9 186 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 ZNF554Q86TJ5 538 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 TMEM219Q86XT9 240 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 PRR18Q8N4B5 295 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 ZNF565Q8N9K5 539 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 OR13D1Q8NGV5 346 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 NUDCD2Q8WVJ2 157 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 LEAP2Q969E1 77 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 ARL11Q969Q4 196 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 CITED1Q99966 193 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 CMSS1Q9BQ75 279 aaKnown RBP6.97□□□□□ -1.29
SNCA-211ENST00000508895 ABCG5Q9H222 651 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 HEXA-AS1Q9H8Q6 139 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 TAF9BQ9HBM6 251 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 CHMP1AQ9HD42 196 aaPredicted RBP6.97□□□□□ -1.29
SNCA-211ENST00000508895 GFOD1Q9NXC2 390 aa6.97□□□□□ -1.29
SNCA-211ENST00000508895 A0A0A6YYH2 397 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 CLPSL1A2RUU4 121 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 A6NDX4 124 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 A6NJ64 397 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 SDCBPO00560 298 aaPredicted RBP6.96□□□□□ -1.3
SNCA-211ENST00000508895 SSX5O60225 188 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 HPGDSO60760 199 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 TSPAN9O75954 239 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 GSTP1P09211 210 aaKnown RBP6.96□□□□□ -1.3
SNCA-211ENST00000508895 CD3GP09693 182 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 PTHLHP12272 177 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 ZNF182P17025 639 aaPredicted RBP6.96□□□□□ -1.3
SNCA-211ENST00000508895 GZMHP20718 246 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 GNG10P50151 68 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 HERPUD1Q15011 391 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 SSX2Q16385 188 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 LRRC75BQ2VPJ9 315 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 HLA-DRB5Q30154 266 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 OR52W1Q6IF63 320 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 SHISA2Q6UWI4 295 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 IZUMO1Q8IYV9 350 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 ZNF439Q8NDP4 499 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 OR10A7Q8NGE5 316 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 SETD6Q8TBK2 473 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 ACOT12Q8WYK0 555 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 MAFIPQ8WZ33 124 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 SLIRPQ9GZT3 109 aaKnown RBP6.96□□□□□ -1.3
SNCA-211ENST00000508895 RIMS4Q9H426 269 aaPredicted RBP6.96□□□□□ -1.3
SNCA-211ENST00000508895 C16orf95Q9H693 158 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 Q9N2K0 584 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 COMMD3Q9UBI1 195 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 RSL24D1Q9UHA3 163 aaKnown RBP6.96□□□□□ -1.3
SNCA-211ENST00000508895 PSG11Q9UQ72 335 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 TBL2Q9Y4P3 447 aaKnown RBP6.96□□□□□ -1.3
SNCA-211ENST00000508895 RNF114Q9Y508 228 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 HILPDAQ9Y5L2 63 aa6.96□□□□□ -1.3
SNCA-211ENST00000508895 TET2Q6N021 2002 aaPredicted RBP6.96□□□□□ -1.3
SNCA-211ENST00000508895 IGKV1D-8A0A087WSZ0 117 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 IGKV1-6A0A0C4DH72 117 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 A0A1W2PPE3 182 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 CCDC160A6NGH7 325 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 SH2D7A6NKC9 451 aaPredicted RBP6.95□□□□□ -1.3
SNCA-211ENST00000508895 ZNF701M0R085 212 aaPredicted RBP6.95□□□□□ -1.3
SNCA-211ENST00000508895 SLC31A2O15432 143 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 SPINT2O43291 252 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 XRCC3O43542 346 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 TSPAN15O95858 294 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 APOA1P02647 267 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 CRYBA1P05813 215 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 ELK1P19419 428 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 PPP1CCP36873 323 aaKnown RBP6.95□□□□□ -1.3
SNCA-211ENST00000508895 TMEM95Q3KNT9 176 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 TMEM30BQ3MIR4 351 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 CDNFQ49AH0 187 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 PRR31Q5SQ13 230 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 HACD4Q5VWC8 232 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 LAX1Q8IWV1 398 aa6.95□□□□□ -1.3
SNCA-211ENST00000508895 ABHD12Q8N2K0 398 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms